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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr10130.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 242aa MW: 28142.9 Da PI: 7.5843 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 85 | 4.5e-27 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+ien +nrqvt+skRr g++KKA+EL vLCdaev++i++sstgk+ ey+s Dr10130.1 9 KKIENPTNRQVTYSKRRLGLMKKAKELTVLCDAEVLIIMVSSTGKFAEYCS 59 68***********************************************96 PP | |||||||
2 | K-box | 46.5 | 1.6e-16 | 136 | 190 | 34 | 88 |
K-box 34 eqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelq 88 e +++Ge+ e L ++eL+ Leq L++slk +R++K++++ +q+++ +kke + + Dr10130.1 136 EGNKRMGENTEGLAMEELRGLEQSLDESLKLVRNRKYHVISTQTDTYKKKEMRDE 190 55689**********************************************8755 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence |
MGRGKIEIKK IENPTNRQVT YSKRRLGLMK KAKELTVLCD AEVLIIMVSS TGKFAEYCSP 60 STEIKRMFDR YQQVSGVNLW SAQYEAMSCY FYFYFFFFFF FSLYPFGKVF YGVFFMGVEN 120 AQHSEASARN QPQPQEGNKR MGENTEGLAM EELRGLEQSL DESLKLVRNR KYHVISTQTD 180 TYKKKEMRDE SSEYVYLSEG HNNYEEELAL ANGASHLFAF QLQPNQPNLH GFRFNSHDLS 240 LA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54340.1 | 9e-42 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr10130.1 |