PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr08215.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | TCP | ||||||||
Protein Properties | Length: 249aa MW: 26185.7 Da PI: 10.2881 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 126.1 | 3.6e-39 | 62 | 145 | 2 | 85 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasns 85 a+++++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti+WLlqqa+p+i+++tgt++++as+ +a++s +++s Dr08215.1 62 APRRSSNKDRHTKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALNAAASAAPGAAS 145 7899*****************************************************************777444333333322 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence |
MDPKVSQEAP KFHQALGLPE NSKREPTTAA RASSAAPESS SLRTAMASAP QDKEETQKKQ 60 LAPRRSSNKD RHTKVDGRGR RIRMPALCAA RIFQLTRELG HKSDGETIQW LLQQAEPSII 120 AATGTGTIPA SALNAAASAA PGAASASAGL HQSFASLMGG RAHHGGLWPA QGAFLGQGAA 180 GGDAQLMQRI GLHGLEIPGG GMGPMSFASM LGGHVACSLR EESPNLLVQP DGLQYRCMLR 240 EKERLNLIS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 239 | 244 | LREKER |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G27010.1 | 7e-43 | TCP family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr08215.1 |