PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr05385.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | WOX | ||||||||
Protein Properties | Length: 260aa MW: 29597.1 Da PI: 6.4242 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 66.8 | 2.8e-21 | 88 | 148 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+t+ ql++Le+ F n +ps++++++++++l +++e++V++WFqNrRa+ k+ Dr05385.1 88 RQRWTPTPMQLQILENIFDHgNGTPSKQKIKDITAELsqhgQISETNVYNWFQNRRARSKR 148 89*****************99**************************************97 PP | |||||||
2 | Wus_type_Homeobox | 103.9 | 1.1e-33 | 87 | 150 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ar+RWtPtp Q++iLe+++++G tP+k++i++itaeL+++G+i+++NV++WFQNr+aR+++kq Dr05385.1 87 ARQRWTPTPMQLQILENIFDHGNGTPSKQKIKDITAELSQHGQISETNVYNWFQNRRARSKRKQ 150 789***********************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence |
MNREAEEERR GGGDGDVVGD GVMYVKVMTD EQMEVLRKQI SAYATICEQL VEMHKAMTAQ 60 QDSLAGMKLG NLYCDPLMTT GCHRITARQR WTPTPMQLQI LENIFDHGNG TPSKQKIKDI 120 TAELSQHGQI SETNVYNWFQ NRRARSKRKQ TASLPNNSES EVEAEVESPD EKKSKSERIL 180 SHDNLHQVIP ASSFHTKEQD HSRTQNIFPS NDNVKPSPTF NQIPFYGGSL SNQRMDHLMG 240 KEYPGNFGFF QPGERYDMLQ |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 142 | 150 | RRARSKRKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35550.1 | 6e-70 | WOX family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr05385.1 |