PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr04389.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

CAMTA

Protein Properties

Length: 2309aa MW: 254845 Da PI: 7.0243

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr04389.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	140.3	5.6e-44	29	160	2	117
CG-1 2 lke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvgg...............vevlycyY 85 ++e +rw +++e++a+L n+++++l+ ++ + p+sg++ +++rk++r+frkDG++wkkkkdgktv+E+hekLK + e +++yY Dr04389.1 29 MEEaASRWFRPNEVHALLSNYTRFKLQPKPVELPPSGTVRFFDRKMLRNFRKDGHNWKKKKDGKTVQEAHEKLKCHRkselgypmkkfeignEERIHVYY 128 455599*******************************************************************9999***************** PP CG-1 86 ahseenptfqrrcywlLeeelekivlvhylev 117 a+se++p f rrcywlL+++le+ivlvhy+++ Dr04389.1 129 ARSEDDPCFYRRCYWLLDKDLERIVLVHYRQT 160 ***************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 2309 aa Download sequence
MLSTDSEHLA GAEIHGFHNT XDLDVEXLME EAASRWFRPN EVHALLSNYT RFKLQPKPVE 60 LPPSGTVRFF DRKMLRNFRK DGHNWKKKKD GKTVQEAHEK LKCHRKSELG YPMKKFEIGN 120 EERIHVYYAR SEDDPCFYRR CYWLLDKDLE RIVLVHYRQT SEENIIQQHP ESVECEGDLA 180 GNVVKHIDSP IAPVDSSSGS AQSEMSTSGV MSEEINSRGD PETNTGYGTS QFEKVNELTN 240 HELTLHEINT LEWSDLVGGS PYVDFASDRG GDVSALEQPS HREGSLSCSQ GIGSCQPNAP 300 CSDNXIFGIN GATIGNFQLL ENQQGPAQSF GAASSHYQSS EIRLPEDVSE TVGFPKQNNL 360 ERWDSIGFFN DLQLDSEFLN PDSAVXENDP SAQELFCIVD ISPAWGYSTE ETKVLVIGGF 420 PESQKHLAGH EICCIVDGTC VPMEIVQAGV YRFTAQPHMP GLVDLYLTID GYTPISRVCS 480 FDYCSTALLP GGIPSEVKNA EAKWKDFQIQ MRLAHLLFSS TDNLSVMSNR VKPGNLQEAK 540 KFAXATSPLV EKGWANMIKS TSDNKDSSSI DTQGLFELIL RNKLQEWLLT KIVDGCKKTP 600 LDSQGQGVIH LCVILDYVWA IHLFSLSGLS LDFRDASGWT ALHWAASLGR EKMVAALLSA 660 GANASLVSDP TPECPGGCLA ADLASNGGFD GLAIYLSEKG LTAHFQAMSL SGNISGPTAP 720 ASSSLTRYES IEHLSEQELC LKDSLAAYRN AADAADRIQA AFRERALKLK TKAVQLVEPE 780 LEAKAIVAAL RIQHAYRSHN RRIMLKAAAR IQGHFRTWQA RRNFLNMRKQ VIKIQAAFRG 840 YCARRHYTKI VWSVGILEKA VLRWRLKRKG LRGIQVEEPE TMKVDKEQES VVEEDFFLVG 900 QEQAEDRINR SVVRVQTMFR SYRAQQEYRR MKLACEEAKI CWEMGVENYH VIELVGEGSF 960 GKVYKGRRKF TGQTVAMKFI LKHGKSEKDI HNLRQEIEIL RKLKHENIIE MLDAFENPQE 1020 FCVVTEFAQG ELFEVLEDDK CLPEDQVQAI AKQLVRALYY LHSNRIIHRD MKPQNILIGA 1080 GSVVKLCDFG FARAMSANTV VLRSIKGTPL YMAPELVREQ PYNHTADLWS LGVILYELFV 1140 GQPPFYTNSV YALIRHIVKD PVKYPDNMSP NFRSFLKGLL NKVPQSRLSW PALLEHPFVK 1200 ENSDDVEARE TRAAVAAARG CDAAWRGEGN NVASSKIEAS GKRSPETSSE ICKAPSIVND 1260 DRAGSPSPIP ENQQEQASNA CILSSGMVPK IAGPGKAPSS NILYMVSYGA NLLKRHQVLD 1320 KLEKNSRTVK GANIIAQDYE ALSAILLPLK TWSNGSPSSL RDLNTECANQ SFRIVTNMIT 1380 AGAHQSCAAL DDMICVLLEF AAAIVKLNLS EADGLAVKSL STLKKLLDNS GSGIGNSYAR 1440 HWSALKDLYS QILTTNSDAS GRVIYESTAC VAVMLSRVAL GLKTSVAADV SEMVSQKPSP 1500 EQILIQIVBH AKESGIMDLL CECLAASGSS LMSGTLNMVP ATCEACKSIW ALIDAVELIS 1560 MKGQTHLLPL NHSRHHSSIQ ADARIHDENL VLESVKLVEM FVKSFLESRH VQTAFYYCIH 1620 NGLESALNAG FQIISRICIS NHLVCKALCT SLSSSTTSDX LDSGGDGTII SDIFSLLSLC 1680 ASYINKESGE IQNQKCKLSN PHRLVLHSCL ALATVANCLR SEEKISASSI LTSSQKKQRG 1740 RLSVLAHLCS SDDRVVNYNQ PHCLSAMLAL SSILSLESGS TTSSSICESA LVLLPPMATL 1800 RNQLKVLLSD ENEALSKYKL LNWYGVRDGC VGLLKARLNW GGPLAIEQAC SNGIPQLLTC 1860 LLADGLKKDP EGKEISKVRA GLSPIGVVWT LSAMCYCLPG GVFRDVLFRR DHLKLITDLI 1920 TELHLKILKG WRGLGGGTNG IRDLINALVD LLAFPFVAVQ SSPSMPSTSA SINSGFVLNA 1980 ASPGGKIGLE NKEMIKAIEA NLPHYIQVLL EVGFPGRILR CLDFIECKDL GRPIAIIAKM 2040 VGYRPLALQL LREGLLNPSI VQRVLGGSSP REAVVDFLMI VSDLARMSKD FYESIDKAGM 2100 LVFLKEYLNH EDADLRAKAC SAIGNMCRHG PYFYGPLAIN KIIDLLIDRC SDSDKRTRKF 2160 ACFAVGNAAY HNDILYENLR RCIPQLTKLL LSVEEDKTKA NAAGALSNLV RNSNSLCEDI 2220 ISQGALQALL KLASDYSVVA LNPSRGDAMN ESPLKIVLFA LRKMCDHTPC RQFISSSEFL 2280 PLFTQLKRSP NTIIAEYASV IISKAGQTK

Sequence ? help Back to Top

Protein Sequence Length: 2309 aa Download sequence

MLSTDSEHLA GAEIHGFHNT XDLDVEXLME EAASRWFRPN EVHALLSNYT RFKLQPKPVE  60
LPPSGTVRFF DRKMLRNFRK DGHNWKKKKD GKTVQEAHEK LKCHRKSELG YPMKKFEIGN  120
EERIHVYYAR SEDDPCFYRR CYWLLDKDLE RIVLVHYRQT SEENIIQQHP ESVECEGDLA  180
GNVVKHIDSP IAPVDSSSGS AQSEMSTSGV MSEEINSRGD PETNTGYGTS QFEKVNELTN  240
HELTLHEINT LEWSDLVGGS PYVDFASDRG GDVSALEQPS HREGSLSCSQ GIGSCQPNAP  300
CSDNXIFGIN GATIGNFQLL ENQQGPAQSF GAASSHYQSS EIRLPEDVSE TVGFPKQNNL  360
ERWDSIGFFN DLQLDSEFLN PDSAVXENDP SAQELFCIVD ISPAWGYSTE ETKVLVIGGF  420
PESQKHLAGH EICCIVDGTC VPMEIVQAGV YRFTAQPHMP GLVDLYLTID GYTPISRVCS  480
FDYCSTALLP GGIPSEVKNA EAKWKDFQIQ MRLAHLLFSS TDNLSVMSNR VKPGNLQEAK  540
KFAXATSPLV EKGWANMIKS TSDNKDSSSI DTQGLFELIL RNKLQEWLLT KIVDGCKKTP  600
LDSQGQGVIH LCVILDYVWA IHLFSLSGLS LDFRDASGWT ALHWAASLGR EKMVAALLSA  660
GANASLVSDP TPECPGGCLA ADLASNGGFD GLAIYLSEKG LTAHFQAMSL SGNISGPTAP  720
ASSSLTRYES IEHLSEQELC LKDSLAAYRN AADAADRIQA AFRERALKLK TKAVQLVEPE  780
LEAKAIVAAL RIQHAYRSHN RRIMLKAAAR IQGHFRTWQA RRNFLNMRKQ VIKIQAAFRG  840
YCARRHYTKI VWSVGILEKA VLRWRLKRKG LRGIQVEEPE TMKVDKEQES VVEEDFFLVG  900
QEQAEDRINR SVVRVQTMFR SYRAQQEYRR MKLACEEAKI CWEMGVENYH VIELVGEGSF  960
GKVYKGRRKF TGQTVAMKFI LKHGKSEKDI HNLRQEIEIL RKLKHENIIE MLDAFENPQE  1020
FCVVTEFAQG ELFEVLEDDK CLPEDQVQAI AKQLVRALYY LHSNRIIHRD MKPQNILIGA  1080
GSVVKLCDFG FARAMSANTV VLRSIKGTPL YMAPELVREQ PYNHTADLWS LGVILYELFV  1140
GQPPFYTNSV YALIRHIVKD PVKYPDNMSP NFRSFLKGLL NKVPQSRLSW PALLEHPFVK  1200
ENSDDVEARE TRAAVAAARG CDAAWRGEGN NVASSKIEAS GKRSPETSSE ICKAPSIVND  1260
DRAGSPSPIP ENQQEQASNA CILSSGMVPK IAGPGKAPSS NILYMVSYGA NLLKRHQVLD  1320
KLEKNSRTVK GANIIAQDYE ALSAILLPLK TWSNGSPSSL RDLNTECANQ SFRIVTNMIT  1380
AGAHQSCAAL DDMICVLLEF AAAIVKLNLS EADGLAVKSL STLKKLLDNS GSGIGNSYAR  1440
HWSALKDLYS QILTTNSDAS GRVIYESTAC VAVMLSRVAL GLKTSVAADV SEMVSQKPSP  1500
EQILIQIVBH AKESGIMDLL CECLAASGSS LMSGTLNMVP ATCEACKSIW ALIDAVELIS  1560
MKGQTHLLPL NHSRHHSSIQ ADARIHDENL VLESVKLVEM FVKSFLESRH VQTAFYYCIH  1620
NGLESALNAG FQIISRICIS NHLVCKALCT SLSSSTTSDX LDSGGDGTII SDIFSLLSLC  1680
ASYINKESGE IQNQKCKLSN PHRLVLHSCL ALATVANCLR SEEKISASSI LTSSQKKQRG  1740
RLSVLAHLCS SDDRVVNYNQ PHCLSAMLAL SSILSLESGS TTSSSICESA LVLLPPMATL  1800
RNQLKVLLSD ENEALSKYKL LNWYGVRDGC VGLLKARLNW GGPLAIEQAC SNGIPQLLTC  1860
LLADGLKKDP EGKEISKVRA GLSPIGVVWT LSAMCYCLPG GVFRDVLFRR DHLKLITDLI  1920
TELHLKILKG WRGLGGGTNG IRDLINALVD LLAFPFVAVQ SSPSMPSTSA SINSGFVLNA  1980
ASPGGKIGLE NKEMIKAIEA NLPHYIQVLL EVGFPGRILR CLDFIECKDL GRPIAIIAKM  2040
VGYRPLALQL LREGLLNPSI VQRVLGGSSP REAVVDFLMI VSDLARMSKD FYESIDKAGM  2100
LVFLKEYLNH EDADLRAKAC SAIGNMCRHG PYFYGPLAIN KIIDLLIDRC SDSDKRTRKF  2160
ACFAVGNAAY HNDILYENLR RCIPQLTKLL LSVEEDKTKA NAAGALSNLV RNSNSLCEDI  2220
ISQGALQALL KLASDYSVVA LNPSRGDAMN ESPLKIVLFA LRKMCDHTPC RQFISSSEFL  2280
PLFTQLKRSP NTIIAEYASV IISKAGQTK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16150.1	0.0	CAMTA family protein

Link Out ? help Back to Top
Ensembl	Dr04389.1