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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr00522.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 216aa MW: 24944.4 Da PI: 8.4644 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 92.9 | 1.5e-29 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rien + rqvtfskRr g+lKKA+ELSvLCdaeva+i+fs++gklye++s Dr00522.1 10 RIENATSRQVTFSKRRSGLLKKAFELSVLCDAEVALIVFSPRGKLYEFAS 59 8***********************************************86 PP | |||||||
2 | K-box | 77.4 | 3.6e-26 | 79 | 171 | 7 | 99 |
K-box 7 ksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 + e++ ++++ e a + k++e + ++R+llGe+Les+s++eL++Le qLe+sl +iR ++n l+++qie+l++ke++l e n+ Lr+k+e Dr00522.1 79 RGIMEQNLQQWRDETAAIAKNLEVVEASKRKLLGENLESCSIQELHELEFQLERSLCNIRGRRNSLITDQIEKLKEKERMLLEVNELLRQKFE 171 447899*************************************************************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 216 aa Download sequence |
MVRGKTEMRR IENATSRQVT FSKRRSGLLK KAFELSVLCD AEVALIVFSP RGKLYEFASS 60 NMQKTIDRYR VHGKDESARG IMEQNLQQWR DETAAIAKNL EVVEASKRKL LGENLESCSI 120 QELHELEFQL ERSLCNIRGR RNSLITDQIE KLKEKERMLL EVNELLRQKF EAQPQLLLSS 180 ASRDTPSEEQ SPNYIDVETE LYIGRPGDAK TVNLQR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45660.1 | 9e-68 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr00522.1 |