PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cz16g02020.t1

Organism

Chromochloris zofingiensis

Taxonomic ID

31302

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris

Family

ERF

Protein Properties

Length: 947aa MW: 100930 Da PI: 4.3826

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cz16g02020.t1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	36	1.7e-11	99	148	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+w k ++W A++r+ k+ ++g++ t+eeAa+a++ a+ k +g Cz16g02020.t1 99 SSYRGVSWEKAAKKWQAHVRE------AgKKRRIGHYVTEEEAARAYDGAAYKAHG 148 67**************888......33999******************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 947 aa Download sequence
MGLIMADYSF KYVNYRSTSK KWIGQLKIPG QKSWTTVYCA TAPEAARNVD RIIYKVKGPH 60 APLNFPLTDA ERAALDAITL DELMASYRAA GSVFSSGCSS YRGVSWEKAA KKWQAHVREA 120 GKKRRIGHYV TEEEAARAYD GAAYKAHGSK AKLNFPDMLV SDEVIAPVHA TPPPTAVHTS 180 LPADDTLLRD ESSVRVQSMQ AVVIQPPNDA QLSSDLPPAE GSVDDEQYMA DWEDFPGAVG 240 NRTRGASRKI REQEFSSDAE AMQNSVCAHT DTDTIDNKQS QEMQLAAHDE SLSDTQQCRH 300 QQRIDAAHMQ GLGEVAVDDH NVSDGNCEHD SQLSLDAADS DWVDDYDDDD DDDDSMLICD 360 DGLFDDYARC KANHNGKSGD QQVEEPSMPD ISAMPMAAAA GMAVAPAVPA AEASAVHAVC 420 QDETEGVSQG SIVHGTAAPG KVPVPSLLDS SQTKSIGSTP GADCAGVDAA AHPTETNTAV 480 PSAADPTIIM VADGVADPLT ALPTATVPPL QLASAAKVQL CLDAGVSAML EEALLELHLT 540 PGLDDVPLEL FAALGIDLDE NGMGFASSPH VIPPSTTAPV FRGNPHINNQ YPGEPDKLTD 600 AHQLPAQHDS QNTGPCAKDT APAEKSLHIL EGDYHTWAPT EEDLQNEWFH MPPDSDEEFD 660 PHQVPLPVVP LTGNPKVDMI TGLKMVIEES QAHFPIRAKF VRMGALIKEA CPELSYEPLR 720 KRPRPFESED PPPVAAVAGN TTTPTEPWRF PVAMKPLKMK AEQLCKQVDT SLPTAGYRWA 780 AGGSGSSSSS SRMPVDAVDA ILLMGYDPDD EDEYYLGASD DDQRAVDDSN DSHAAKPIDM 840 QTSSHIILRT ATTRPSDSAP AVALQHGNTV HSPTASAAAG NAVAAPAAGG GGTSGQSHND 900 MMNMDADPSG RLVGQSPILM KHVPVSCISA DELRMLAVAE HDAIQL*

Sequence ? help Back to Top

Protein Sequence Length: 947 aa Download sequence

MGLIMADYSF KYVNYRSTSK KWIGQLKIPG QKSWTTVYCA TAPEAARNVD RIIYKVKGPH  60
APLNFPLTDA ERAALDAITL DELMASYRAA GSVFSSGCSS YRGVSWEKAA KKWQAHVREA  120
GKKRRIGHYV TEEEAARAYD GAAYKAHGSK AKLNFPDMLV SDEVIAPVHA TPPPTAVHTS  180
LPADDTLLRD ESSVRVQSMQ AVVIQPPNDA QLSSDLPPAE GSVDDEQYMA DWEDFPGAVG  240
NRTRGASRKI REQEFSSDAE AMQNSVCAHT DTDTIDNKQS QEMQLAAHDE SLSDTQQCRH  300
QQRIDAAHMQ GLGEVAVDDH NVSDGNCEHD SQLSLDAADS DWVDDYDDDD DDDDSMLICD  360
DGLFDDYARC KANHNGKSGD QQVEEPSMPD ISAMPMAAAA GMAVAPAVPA AEASAVHAVC  420
QDETEGVSQG SIVHGTAAPG KVPVPSLLDS SQTKSIGSTP GADCAGVDAA AHPTETNTAV  480
PSAADPTIIM VADGVADPLT ALPTATVPPL QLASAAKVQL CLDAGVSAML EEALLELHLT  540
PGLDDVPLEL FAALGIDLDE NGMGFASSPH VIPPSTTAPV FRGNPHINNQ YPGEPDKLTD  600
AHQLPAQHDS QNTGPCAKDT APAEKSLHIL EGDYHTWAPT EEDLQNEWFH MPPDSDEEFD  660
PHQVPLPVVP LTGNPKVDMI TGLKMVIEES QAHFPIRAKF VRMGALIKEA CPELSYEPLR  720
KRPRPFESED PPPVAAVAGN TTTPTEPWRF PVAMKPLKMK AEQLCKQVDT SLPTAGYRWA  780
AGGSGSSSSS SRMPVDAVDA ILLMGYDPDD EDEYYLGASD DDQRAVDDSN DSHAAKPIDM  840
QTSSHIILRT ATTRPSDSAP AVALQHGNTV HSPTASAAAG NAVAAPAAGG GGTSGQSHND  900
MMNMDADPSG RLVGQSPILM KHVPVSCISA DELRMLAVAE HDAIQL*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	122	152	KKRRIGHYVTEEEAARAYDGAAYKAHGSKAK
2	721	725	KRPRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51190.1	6e-09	AP2 family protein