PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cz10g18210.t1

Organism

Chromochloris zofingiensis

Taxonomic ID

31302

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris

Family

ERF

Protein Properties

Length: 569aa MW: 58857.1 Da PI: 5.1101

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cz10g18210.t1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	67.3	2.9e-21	177	226	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrdp+ k +r +lg+f+taeeAa+a++ a+++++g Cz10g18210.t1 177 QYRGVRQRP-WGKWAAEIRDPN---KGQRLWLGTFDTAEEAARAYDSAARSIRG 226 69*****.******93...25***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 569 aa Download sequence
MVINSALLPP NLSQLQGVYL AQIAGPGSAT AFNAVLRPAL HNTATTAGGQ MPLTLPAALS 60 LTPGQHVAFL QQTSKPLMAP LSILTSRPIT SLPSSSIPLM QLPIHTQISS TYQLPLQAPV 120 SLPVSSAPAP TVLAPPAVAV TAPTAVQSPV APARPATTRA ATATPSASHK SKKYSNQYRG 180 VRQRPWGKWA AEIRDPNKGQ RLWLGTFDTA EEAARAYDSA ARSIRGAGAI CNFPETADEK 240 RNANAAYRSC PVQQHSQHVK LEPQQPAAFE DEPELQAPPT AVIPPLPRTR GSINTPLSQQ 300 RASPHHAPTS NPHCLRPRRG AAAAAGAALL GSQQSAPVEV MAESPVLGGS PMFGASPFNP 360 LASSPSTLMA MAGSSWCMPS AMKRAHTADC TTQQTQGVSS LTHAAAILND EALRSAGLSS 420 GDFLGPDWGA MPLGSLGAMS GVGSMAGSFL GGGGFSFGVL GSSIGRAMQQ HQAVADVLGV 480 DADMNQNSSG DSESANTAIA DFEGDDDAAE DEDGPIMGML DDEDEDCMQD GHDYDMDEDD 540 ALAGCSPATA CILEDVMMAG SPLFHFKP*

Sequence ? help Back to Top

Protein Sequence Length: 569 aa Download sequence

MVINSALLPP NLSQLQGVYL AQIAGPGSAT AFNAVLRPAL HNTATTAGGQ MPLTLPAALS  60
LTPGQHVAFL QQTSKPLMAP LSILTSRPIT SLPSSSIPLM QLPIHTQISS TYQLPLQAPV  120
SLPVSSAPAP TVLAPPAVAV TAPTAVQSPV APARPATTRA ATATPSASHK SKKYSNQYRG  180
VRQRPWGKWA AEIRDPNKGQ RLWLGTFDTA EEAARAYDSA ARSIRGAGAI CNFPETADEK  240
RNANAAYRSC PVQQHSQHVK LEPQQPAAFE DEPELQAPPT AVIPPLPRTR GSINTPLSQQ  300
RASPHHAPTS NPHCLRPRRG AAAAAGAALL GSQQSAPVEV MAESPVLGGS PMFGASPFNP  360
LASSPSTLMA MAGSSWCMPS AMKRAHTADC TTQQTQGVSS LTHAAAILND EALRSAGLSS  420
GDFLGPDWGA MPLGSLGAMS GVGSMAGSFL GGGGFSFGVL GSSIGRAMQQ HQAVADVLGV  480
DADMNQNSSG DSESANTAIA DFEGDDDAAE DEDGPIMGML DDEDEDCMQD GHDYDMDEDD  540
ALAGCSPATA CILEDVMMAG SPLFHFKP*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72360.1	3e-20	ERF family protein