PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cz06g18230.t1

Organism

Chromochloris zofingiensis

Taxonomic ID

31302

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris

Family

ERF

Protein Properties

Length: 1715aa MW: 179668 Da PI: 6.2887

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cz06g18230.t1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	39.2	1.7e-12	338	385	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 +GV+wdkk+grW++++ g +++++ g+f +eeAa+a++ +l+g Cz06g18230.t1 338 LRGVFWDKKTGRWRSQL------GyHNRKIFMGYFNDPEEAARAYDMKLVELHG 385 59************4......44479*****************9999998 PP

Sequence ? help Back to Top
Protein Sequence Length: 1715 aa Download sequence
MTCTTVCFSK VTSDCYHLAQ FSRQSTSAAA TRPKQPCRAN TGICALPNSV LPEPPPSVKR 60 ELLPVMDGDD DHEAAQQLLQ MSGAGQEAPQ RQQQPQDVQS SGPTDHQPVD HIALRKPEPS 120 TNMQVEQPPS QTSQAGQQDV PHGPRQQQAG TPKADDISMA ADQHVIDIAA AAVERGTGVE 180 HTRAASPVRQ DELSRVREVA RDGGVVVKHE SLSHVGAVAA GSEADVIGGT PVGGGDGDDD 240 DDGHDDDMAA ATTSDVADGE PGDDADDVGG GGDDADDDDT HGDEEGEDGD EHRRSSAGYS 300 LRTGARTHVI DVLGLAAGAR GKRGGGKKPA KSDGKSNLRG VFWDKKTGRW RSQLGYHNRK 360 IFMGYFNDPE EAARAYDMKL VELHGSAAAP KTNYPITDYI TDGSYKTQHD EDLDAGAGDD 420 DQGEGSEPTH SPAKAPRTKR KPAAQHPDRT APSWDVEEEV WGPDDQDVGN PIPHHAVKKP 480 RLPLRNPSSS TAMPPNQIYG GLSPPRKGGA GRPRPPMDLY RLESGDIRAA QALSGLRTMG 540 RFDRRLDMHD DEPQPRPVQS PRGTAAAHHG GGGTRGNLSP MRGNLSQWYG GHRPVEDRGI 600 SPPGAGFGPP QPAISGNRPR QARDSHGRFM SNKAGGGGGG SRRSRSAGGG AAREGEKGRG 660 ESRGTASTRK VRDTAWTGGA RHGGGGDMDV DDDEGAPHVV RRQRGGRYQM PPPWRGETQM 720 PGQQRWRGAP GGYGGRGAVG DMTPEREEGG GGYGGVATSR YEDDIYDQDR GGAYDEYWRE 780 RPAPYYPSAA SRRWSGRMGV GPELHRQGST ASHQPAGGRP RVAADTVAGA ALQRDGSLGL 840 VRGSMPGGNQ LQAAGDRWSM PGDVAPPLTP FYQQARMVQP GAARMGSITS MDGFRRGSGD 900 QHDVDMTHVG VGGGADDVTQ TVLSQLLPLL SPEQQQQLMQ QPGAMLVAAA AAVAAGVPGA 960 QDLLTNALAA AQQPTPQLTD HLSPDAAADN NMQTPENMAA LLQSLQPSLL QAQQQHLPAG 1020 RADSRSGLAA APRQPSASGD VSAYGSPGPA RHHALNGEAS QEAAGLHLTG KGVRPGMGLK 1080 GPIPPFAANN NNVNASRHTR PGTGADLGPT LSAMVQSLKR PNAISGPVSP DRPPPTSAAA 1140 AAAAGLSPDL VRGLMGSVGP RNMVGEGSDL GLATSSIKDT NKLLEALTAA LASVATNQNH 1200 AAADVGQTGD AVKQSVTGES LQLKQADTAE ATGGQMKGGN NLPYRQQPAK HEARPDPEAV 1260 AGVNHRTPQQ LKAQGMTMPQ PFGDLTVRRA NSSRPQKVLH QQQQQQQHFH LHQASQLQPE 1320 TPAAIQHGRA HQSPKPTESN SIPSLAPDTS LEPAACALEP LVLLLDQELD LNRFEEILHD 1380 KLNQIQPVLF QLAKSAVEES GGSATAPQLV LAPIVLPYPV QVDSNGDIVA SQSGIHHVIH 1440 GIARGSVEGL ANTARNLKQH AASVAGADVS SPAGEGAGGK ASSKDTRNTP PVIGEDGDNA 1500 LLDEHNVNEE GTFPGGQAGT VAGTHEQVRT PTAAAMPVTT ATFVTDPHTP KTPTEMTNKV 1560 MTDKNTAQAN DGDIPTLYNG SKQDNAASGM DVDRQQPKAS GRQQVAAGLD LPGGDRALPM 1620 TIMSAATVEQ LMRNQREGKQ QQEQQQQAAM PQGSAPAPAT NGAGGGGNEL RAVGMSRPLS 1680 PLYGQEGGQQ PPEDLATQQL MRMLQSLQNM HGKT*

Sequence ? help Back to Top

Protein Sequence Length: 1715 aa Download sequence

MTCTTVCFSK VTSDCYHLAQ FSRQSTSAAA TRPKQPCRAN TGICALPNSV LPEPPPSVKR  60
ELLPVMDGDD DHEAAQQLLQ MSGAGQEAPQ RQQQPQDVQS SGPTDHQPVD HIALRKPEPS  120
TNMQVEQPPS QTSQAGQQDV PHGPRQQQAG TPKADDISMA ADQHVIDIAA AAVERGTGVE  180
HTRAASPVRQ DELSRVREVA RDGGVVVKHE SLSHVGAVAA GSEADVIGGT PVGGGDGDDD  240
DDGHDDDMAA ATTSDVADGE PGDDADDVGG GGDDADDDDT HGDEEGEDGD EHRRSSAGYS  300
LRTGARTHVI DVLGLAAGAR GKRGGGKKPA KSDGKSNLRG VFWDKKTGRW RSQLGYHNRK  360
IFMGYFNDPE EAARAYDMKL VELHGSAAAP KTNYPITDYI TDGSYKTQHD EDLDAGAGDD  420
DQGEGSEPTH SPAKAPRTKR KPAAQHPDRT APSWDVEEEV WGPDDQDVGN PIPHHAVKKP  480
RLPLRNPSSS TAMPPNQIYG GLSPPRKGGA GRPRPPMDLY RLESGDIRAA QALSGLRTMG  540
RFDRRLDMHD DEPQPRPVQS PRGTAAAHHG GGGTRGNLSP MRGNLSQWYG GHRPVEDRGI  600
SPPGAGFGPP QPAISGNRPR QARDSHGRFM SNKAGGGGGG SRRSRSAGGG AAREGEKGRG  660
ESRGTASTRK VRDTAWTGGA RHGGGGDMDV DDDEGAPHVV RRQRGGRYQM PPPWRGETQM  720
PGQQRWRGAP GGYGGRGAVG DMTPEREEGG GGYGGVATSR YEDDIYDQDR GGAYDEYWRE  780
RPAPYYPSAA SRRWSGRMGV GPELHRQGST ASHQPAGGRP RVAADTVAGA ALQRDGSLGL  840
VRGSMPGGNQ LQAAGDRWSM PGDVAPPLTP FYQQARMVQP GAARMGSITS MDGFRRGSGD  900
QHDVDMTHVG VGGGADDVTQ TVLSQLLPLL SPEQQQQLMQ QPGAMLVAAA AAVAAGVPGA  960
QDLLTNALAA AQQPTPQLTD HLSPDAAADN NMQTPENMAA LLQSLQPSLL QAQQQHLPAG  1020
RADSRSGLAA APRQPSASGD VSAYGSPGPA RHHALNGEAS QEAAGLHLTG KGVRPGMGLK  1080
GPIPPFAANN NNVNASRHTR PGTGADLGPT LSAMVQSLKR PNAISGPVSP DRPPPTSAAA  1140
AAAAGLSPDL VRGLMGSVGP RNMVGEGSDL GLATSSIKDT NKLLEALTAA LASVATNQNH  1200
AAADVGQTGD AVKQSVTGES LQLKQADTAE ATGGQMKGGN NLPYRQQPAK HEARPDPEAV  1260
AGVNHRTPQQ LKAQGMTMPQ PFGDLTVRRA NSSRPQKVLH QQQQQQQHFH LHQASQLQPE  1320
TPAAIQHGRA HQSPKPTESN SIPSLAPDTS LEPAACALEP LVLLLDQELD LNRFEEILHD  1380
KLNQIQPVLF QLAKSAVEES GGSATAPQLV LAPIVLPYPV QVDSNGDIVA SQSGIHHVIH  1440
GIARGSVEGL ANTARNLKQH AASVAGADVS SPAGEGAGGK ASSKDTRNTP PVIGEDGDNA  1500
LLDEHNVNEE GTFPGGQAGT VAGTHEQVRT PTAAAMPVTT ATFVTDPHTP KTPTEMTNKV  1560
MTDKNTAQAN DGDIPTLYNG SKQDNAASGM DVDRQQPKAS GRQQVAAGLD LPGGDRALPM  1620
TIMSAATVEQ LMRNQREGKQ QQEQQQQAAM PQGSAPAPAT NGAGGGGNEL RAVGMSRPLS  1680
PLYGQEGGQQ PPEDLATQQL MRMLQSLQNM HGKT*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	2e-06	AP2 family protein