PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028124221.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

TCP

Protein Properties

Length: 252aa MW: 27452.5 Da PI: 9.4288

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028124221.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	122.1	6.4e-38	28	119	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg....k 89 a+k+++++++h kv+gR+RR+R++a+caar+F+L++eLG+++d++ti+WLlqq++p+i+++tgt++++as+ a s+s++ s + + XP_028124221.1 28 APKRSSNKDRHKKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQSEPSIIAATGTGTIPASALAATGYSVSEQGTSVSvgldS 119 789******************************************************************88844444444443333333431 PP

Sequence ? help Back to Top
Protein Sequence Length: 252 aa Download sequence
MAENKPTEIK DLQIVVTNKD DDSKKQLAPK RSSNKDRHKK VDGRGRRIRM PALCAARIFQ 60 LTRELGHKSD GETIQWLLQQ SEPSIIAATG TGTIPASALA ATGYSVSEQG TSVSVGLDSN 120 RTNWTMINNN SNLNRSHMAT GLWPPLPGFV HNSGISTSNS STENSNFFLS KLGFHGFEYP 180 NMSFSTILSG NYQNLPGLEL GLSPEGHIGV VNTQTLGQFY QQMGQSRGGG DPMNQQPQQQ 240 HPDKDNSQGS KP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27010.1	1e-61	TCP family protein