PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028123677.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family Nin-like
Protein Properties Length: 319aa    MW: 35673.5 Da    PI: 6.1635
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028123677.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK32.61.6e-10142188452
          RWP-RK   4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                     +i +ed+ ++ +l++++AAk+L+ +  +LKr    yGI+RWP R i+++
  XP_028123677.1 142 KIPIEDILQNSELSLENAAKSLKFSKFTLKRV--PYGIERWPPREINKV 188
                     67889**************************9..7************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MPTSNNASED PRTSLRKILE TMTKNFCCLR VTSREELGVE EFSIQNGEKL DPVQIPQTTI  60
SLPQLELSQN EVEVMQVDSL DQQLVNAINT GSNVGCTEHN NFVITCTQEK STVKVSQRKG  120
NKSGGTVKTS KRDGNNIGVK IKIPIEDILQ NSELSLENAA KSLKFSKFTL KRVPYGIERW  180
PPREINKVGC SQLNESAPCV NSDHLPSTQS SATIVHTKPH DTTMQDANIM TIKAKYGECI  240
TMKFRLSLSS RFVQLQQEVA KRLNLKAGTY YVKYEDEDGE LILIGCDEDL QDYMRDSISL  300
GRSSIVVLLE QKLPITDNQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24020.13e-14Nin-like family protein