PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028120326.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Nin-like

Protein Properties

Length: 586aa MW: 65220.4 Da PI: 7.2036

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028120326.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	60	4.4e-19	255	305	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 e++i le l+++F+l++ dAA++L+v+ ++LKriCR++GI+ WP+Rk ++l XP_028120326.1 255 EESIGLEILHQHFHLTLLDAASKLNVSRSTLKRICRKLGISEWPSRKRNKL 305 7899*******************************************8775 PP

Sequence ? help Back to Top
Protein Sequence Length: 586 aa Download sequence
MKEVLLDLAK CPSGKLKLLL QEAETLKPIP GFMIEETMTN SLRFLIESTA QYALSQISAT 60 VENLHQSALT TSLQPLVLDP HNNELHRCKI ASLIYMFSLD SGMGVDCGHH SHAFLLKLPF 120 WNPNVQFYHR KEPVMLNHAQ YYNVGGTLAL PVFEASRQSC VGVLELIMTS QKISYTPEHV 180 RATKSSTNEK LDLRLDCFQI LQTARSPLQP QARQNGGPIE NGSNVISACQ SHNAVVLSEI 240 EDTGESSKIK SGKKEESIGL EILHQHFHLT LLDAASKLNV SRSTLKRICR KLGISEWPSR 300 KRNKLKPVDE SVPSAGANDP NLYTSPSLLS TVVVLDQPKP PGSELQREKG KSLCYRTEVG 360 FGQVERLLDY MPGGYHNELR VQTGILQEFG RMTPKENLFV GVTNEQCSKV GGSSELVFQP 420 TRPNPSIAHC NPDAILSTLS QTPSRDLLLI RSSEGFSENA VLASRQRTGP APKRIKTNLA 480 RAVPNFTARQ EATYGEDMIR FRFPSTSGII ELKNELTKRL PLKVGTFNIK YEDDNQESIL 540 MACDADLQEC MDIWTSPDNN EVRLFIHGCE SKGIDWNLEP VNAAKE

Sequence ? help Back to Top

Protein Sequence Length: 586 aa Download sequence

MKEVLLDLAK CPSGKLKLLL QEAETLKPIP GFMIEETMTN SLRFLIESTA QYALSQISAT  60
VENLHQSALT TSLQPLVLDP HNNELHRCKI ASLIYMFSLD SGMGVDCGHH SHAFLLKLPF  120
WNPNVQFYHR KEPVMLNHAQ YYNVGGTLAL PVFEASRQSC VGVLELIMTS QKISYTPEHV  180
RATKSSTNEK LDLRLDCFQI LQTARSPLQP QARQNGGPIE NGSNVISACQ SHNAVVLSEI  240
EDTGESSKIK SGKKEESIGL EILHQHFHLT LLDAASKLNV SRSTLKRICR KLGISEWPSR  300
KRNKLKPVDE SVPSAGANDP NLYTSPSLLS TVVVLDQPKP PGSELQREKG KSLCYRTEVG  360
FGQVERLLDY MPGGYHNELR VQTGILQEFG RMTPKENLFV GVTNEQCSKV GGSSELVFQP  420
TRPNPSIAHC NPDAILSTLS QTPSRDLLLI RSSEGFSENA VLASRQRTGP APKRIKTNLA  480
RAVPNFTARQ EATYGEDMIR FRFPSTSGII ELKNELTKRL PLKVGTFNIK YEDDNQESIL  540
MACDADLQEC MDIWTSPDNN EVRLFIHGCE SKGIDWNLEP VNAAKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	9e-40	Nin-like family protein