PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028117103.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family Dof
Protein Properties Length: 233aa    MW: 24293.1 Da    PI: 7.8281
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028117103.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof122.61.3e-382382362
          zf-Dof  3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                     ++l+cprCdstntkfCyynny+ sqPr+fCk+CrryWt+GG+lr++PvGgg+rkn k+s
  XP_028117103.1 23 PEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGGSRKNAKRS 82
                    57899***************************************************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MPSDSGERRP TRPQQVGAPP PEPEHLPCPR CDSTNTKFCY YNNYNFSQPR HFCKSCRRYW  60
THGGTLRDIP VGGGSRKNAK RSRPTTTTSS AAAQDYHHHH HISVPTATPV LFGLSSAAAE  120
HGLSVPFVGD VKPGLNGCGS FTSLLSTQAP GFLALGGFGL GLGSGFEEMG FGLGRAVWPI  180
SSVGDGGAGG AAGGANMIGS TWQLESGEGG FITGEDCFSL PDLAISTPGN GLK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50410.14e-44Dof family protein