PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028116735.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MYB | ||||||||
Protein Properties | Length: 315aa MW: 35404.8 Da PI: 8.7747 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51.1 | 3.1e-16 | 14 | 59 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v+++G+ +W++Ia ++ gR++k+c++rw++ XP_028116735.1 14 RGHWKPAEDSQLKQLVALYGPQNWNLIADKLE-GRSGKSCRLRWFNQ 59 899*****************************.***********996 PP | |||||||
2 | Myb_DNA-binding | 54.4 | 2.9e-17 | 66 | 110 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r ++++eE+e+l a++ +G++ W+ Iar ++ gRt++ +k++w+ + XP_028116735.1 66 RRAFSEEEEERLMAAHRVYGNK-WAMIARLFP-GRTDNAVKNHWHVV 110 678*******************.*********.***********976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 315 aa Download sequence |
MEGGKQQSNK LCGRGHWKPA EDSQLKQLVA LYGPQNWNLI ADKLEGRSGK SCRLRWFNQL 60 DPRINRRAFS EEEEERLMAA HRVYGNKWAM IARLFPGRTD NAVKNHWHVV MARKYRQHSI 120 AYRRRKLSHS VVGSEPNTFS FYGGNFISSN HFPFDVPIGG FNVLHSMSNG TDEEAVLSSG 180 KDLLLDPCGQ TPFDFFTGLS SRYIPPFPTF YLKRVNDMNS CIGSPNKFWD PIVSRDDYDH 240 HPSQLLAMQY SSLSCNNQLS CLSDTTVSTS QVSVTKLSSS SPSLLAADNT ANTARSHFEI 300 TISPPFIDFL GVGAT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G26780.1 | 7e-78 | MYB family protein |