PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028115583.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

WOX

Protein Properties

Length: 193aa MW: 21800.1 Da PI: 7.7608

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028115583.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	64.9	1.1e-20	11	71	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+t+ ql++Le+lF + n +ps+++++++++ l ++++++V+ WFqNrRa+ k+ XP_028115583.1 11 RQRWTPTPVQLQILERLFDQgNGTPSKQKIKDITSDLsqhgQISKSNVYHWFQNRRARSKR 71 89***************99************************************97 PP
2	Wus_type_Homeobox	100.7	1.1e-32	11	73	3	65
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 r+RWtPtp Q++iLe+l+++G tP+k++i++it+ L+++G+i++ NV++WFQNr+aR+++kq XP_028115583.1 11 RQRWTPTPVQLQILERLFDQGNGTPSKQKIKDITSDLSQHGQISKSNVYHWFQNRRARSKRKQ 73 79***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 193 aa Download sequence
MTSVGHKISG RQRWTPTPVQ LQILERLFDQ GNGTPSKQKI KDITSDLSQH GQISKSNVYH 60 WFQNRRARSK RKQHVAAPNS AESEVETEVE SPDEKKTKPE DFQSQHNPAP RAEDLCFQNP 120 EISSGMRSLD SKSNKGEPMF PSNGSSKPER SLGQISFYDS MLSNPRIDHL IGKMEASGSY 180 NPYLQEDDYS MTS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	65	73	RRARSKRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35550.1	2e-55	WOX family protein