PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028114672.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | WOX | ||||||||
Protein Properties | Length: 275aa MW: 31104.5 Da PI: 7.2533 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 64 | 2.2e-20 | 93 | 153 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+t+ ql++Le+lF + n +ps+++++++++ l ++++++V+ WFqNrRa+ k+ XP_028114672.1 93 RQRWTPTPVQLQILERLFDQgNGTPSKQKIKDITSDLsqhgQISKSNVYHWFQNRRARSKR 153 89*****************99**************************************97 PP | |||||||
2 | Wus_type_Homeobox | 99.8 | 2.1e-32 | 93 | 155 | 3 | 65 |
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 r+RWtPtp Q++iLe+l+++G tP+k++i++it+ L+++G+i++ NV++WFQNr+aR+++kq XP_028114672.1 93 RQRWTPTPVQLQILERLFDQGNGTPSKQKIKDITSDLSQHGQISKSNVYHWFQNRRARSKRKQ 155 79***********************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 275 aa Download sequence |
MDWEKQQNQQ QRQDEVMNSS SNTNNNNGVL VKVMTNEQLE ILRKQIATYA TICDQLVQMH 60 KSLSSHSDLT GARLGNLYCD PLMTSVGHKI SGRQRWTPTP VQLQILERLF DQGNGTPSKQ 120 KIKDITSDLS QHGQISKSNV YHWFQNRRAR SKRKQHVAAP NSAESEVETE VESPDEKKTK 180 PEDFQSQHNP APRAEDLCFQ NPEISSGMRS LDSKSNKGEP MFPSNGSSKP ERSLGQISFY 240 DSMLSNPRID HLIGKMGASG SYNPYLQEDD YNMTS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 147 | 155 | RRARSKRKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35550.1 | 3e-84 | WOX family protein |