PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028114671.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family WOX
Protein Properties Length: 299aa    MW: 33631.6 Da    PI: 6.9489
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028114671.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox63.82.5e-2093153257
                     T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox   2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                     r+R+t+t+ ql++Le+lF + n +ps+++++++++ l    ++++++V+ WFqNrRa+ k+
  XP_028114671.1  93 RQRWTPTPVQLQILERLFDQgNGTPSKQKIKDITSDLsqhgQISKSNVYHWFQNRRARSKR 153
                     89*****************99**************************************97 PP
2Wus_type_Homeobox99.62.4e-3293155365
  Wus_type_Homeobox   3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 
                        r+RWtPtp Q++iLe+l+++G  tP+k++i++it+ L+++G+i++ NV++WFQNr+aR+++kq
     XP_028114671.1  93 RQRWTPTPVQLQILERLFDQGNGTPSKQKIKDITSDLSQHGQISKSNVYHWFQNRRARSKRKQ 155
                        79***********************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MDWEKQQNQQ QRQDEVMNSS SNTNNNNGVL VKVMTNEQLE ILRKQIATYA TICDQLVQMH  60
KSLSSHSDLT GARLGNLYCD PLMTSVGHKI SGRQRWTPTP VQLQILERLF DQGNGTPSKQ  120
KIKDITSDLS QHGQISKSNV YHWFQNRRAR SKRKQHVAAP NSAESEVETE VESPDEKKTK  180
PEDFQSQHNP APRAEDLCFQ NPEISSGMRS LDSKSNKGEP MFPSNGSSKP ERSLGQISFY  240
DSMLSNPITL VTLSASTTRI SSCMMEILII FGIDHLIGKM GASGSYNPYL QEDDYNMTS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1147155RRARSKRKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35550.11e-77WOX family protein