PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028113572.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | Nin-like | ||||||||
Protein Properties | Length: 220aa MW: 24616.8 Da PI: 8.3593 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 41.7 | 2.3e-13 | 74 | 116 | 4 | 46 |
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPh 46 ei l+d+ ++ ++ ++AA +L+v+ ++LKr CR+yG +RWP XP_028113572.1 74 EIPLDDILQNSTKSSQAAADDLKVSRSTLKRVCRRYGFPRWPP 116 68899999999*******************************5 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 220 aa Download sequence |
MPQTTKSLPR LEPLQSGGEM TQLDSSNQQS IDALNNGSNV VSAERCNIDV TCSQEKGKTR 60 RPKRVYNRTR VKIEIPLDDI LQNSTKSSQA AADDLKVSRS TLKRVCRRYG FPRWPPCKKN 120 MVGQSQPSES SRGVDHQTIS QLNFDLPFNQ ASTTLSLSSG LVELQQQIAK RLHLEAGSYY 180 VKYKDEEDHV ILIACDDDLQ DCISTYRLLG TSIVVSIDPK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24020.1 | 3e-12 | Nin-like family protein |