PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028109617.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

WOX

Protein Properties

Length: 294aa MW: 33375 Da PI: 6.5106

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028109617.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	69.4	4.3e-22	112	172	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+t+ ql++Le++Fe+ n +ps+++++e++++l +++e++V++WFqNrRa+ k+ XP_028109617.1 112 RQRWTPTPVQLQILERMFEQgNGTPSKQKIKEITTELsqhgQISETNVYNWFQNRRARSKR 172 89***************99************************************97 PP
2	Wus_type_Homeobox	101.1	8e-33	112	174	3	65
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 r+RWtPtp Q++iLe+++++G tP+k++i++it+eL+++G+i+++NV++WFQNr+aR+++kq XP_028109617.1 112 RQRWTPTPVQLQILERMFEQGNGTPSKQKIKEITTELSQHGQISETNVYNWFQNRRARSKRKQ 174 89***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 294 aa Download sequence
MMMMNWEKQQ NQHQQQHQHQ HQQQQQEEVM NNGGGGNNSN NSSNGGMFVK VMTDEQMEIL 60 RKQIAAYATI CENLVEMHKS LTSHPDLLSG ARLGNLYCDP LVTSVGHKIT GRQRWTPTPV 120 QLQILERMFE QGNGTPSKQK IKEITTELSQ HGQISETNVY NWFQNRRARS KRKQQVTAPN 180 NAESEVETEV ESPNEKKTMS EDFQSQHNSA PRAEDLCFQN PEVSSGMHSV DSQAQKVEPM 240 FASNGSSKPA RSLGQMSFYD SMLSNPRIDH LIGKMEVSGS YNPYLQADDY HMTN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	166	174	RRARSKRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35550.1	1e-89	WOX family protein