![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_028099209.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
|
||||||||
Family | AP2 | ||||||||
Protein Properties | Length: 420aa MW: 47078.4 Da PI: 9.5102 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 49.4 | 1.1e-15 | 78 | 137 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+++GV++++++gr++A+++d s+n k+ k+++lg f+ +e Aa+a++ a+ k++g XP_028099209.1 78 SRFRGVSRHRWTGRFEAHLWDkGSWNAtqrKKgKQVYLGAFDEEESAARAYDLAAIKYWG 137 789******************999988876447*************************98 PP | |||||||
2 | AP2 | 50.6 | 4.8e-16 | 180 | 231 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa a++ a+ +++g XP_028099209.1 180 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYSTQEEAAHAYDIAAIEYRG 231 89****99**********99966...3.6*************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 420 aa Download sequence |
MEMITAVKSE VNPVRRRGVR NAEGGDNSPM AKGGKRRRRE PAPVADGCAD QGEQPQTETL 60 QVDPSSTTTT TTTVKRSSRF RGVSRHRWTG RFEAHLWDKG SWNATQRKKG KQVYLGAFDE 120 EESAARAYDL AAIKYWGPTT FTNFPVPEYE KEIEIMQNLT KEEYLASLRR RSSGFSRGVS 180 KYRGVARHHH NGRWEARIGR VFGNKYLYLG TYSTQEEAAH AYDIAAIEYR GINAVTNFDL 240 STYIRWLRPG GNSVALQEPV QKLEPPLANS STNFMSSQEP PEFTFRSSPY KLGDTGNNMP 300 RKQELLETKM PISPCNTSAS PTALGLLLRS SMFRELVEKN SNVIADDDTD NQNKAKKEPG 360 IGGSDDLRGM FYSNIGSNPY GCSTRSETLQ TQEAENTLPL YNNNKTGQSL WNVAFNLPSN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G54320.3 | 3e-82 | AP2 family protein |