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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028097640.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | AP2 | ||||||||
Protein Properties | Length: 112aa MW: 13064 Da PI: 10.5321 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 24.7 | 5.7e-08 | 63 | 93 | 3 | 36 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkf 36 y+GV+++++ grW A+I + +k +lg+f XP_028097640.1 63 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTF 93 9***************988532...5*******9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 112 aa Download sequence |
MEAKAARAYD LAALKYWGPS THINFPLENY QQELEHMKNM TRQEYVAHLR RKSSGFSRGA 60 SMYRGVTRHH QHGRWQARIG RVAGNKDLYL GTFSEFLCIF SIYLGKNLKL NK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37750.1 | 4e-47 | AP2 family protein |