PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028097223.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | WOX | ||||||||
Protein Properties | Length: 302aa MW: 34434.7 Da PI: 8.974 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 68.5 | 8.1e-22 | 90 | 149 | 3 | 57 |
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 R+++t++ql++Lee++e r+psa++++++A+kl +++ ++V++WFqN++a+e++ XP_028097223.1 90 ARWNPTPDQLRALEEMYEGgIRTPSADQIQQIAAKLrqygKIEGKNVFYWFQNHKARERQ 149 7*****************99**************************************97 PP | |||||||
2 | Wus_type_Homeobox | 115.1 | 3.5e-37 | 89 | 151 | 3 | 65 |
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++RW+Ptp+Q++ Lee+y+ G+rtP++++iq+i+a+L++yGkie+kNVfyWFQN+kaRerqk+ XP_028097223.1 89 SARWNPTPDQLRALEEMYEGGIRTPSADQIQQIAAKLRQYGKIEGKNVFYWFQNHKARERQKR 151 68***********************************************************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 302 aa Download sequence |
MWMMGCSSDC CSSKFNFNFN RSESDSINSR KLRPLIPKPT TNTTFSTMPN PSSYCTCLHK 60 TNLFSLNDHM ATMKEQSKAD INTTVALVSA RWNPTPDQLR ALEEMYEGGI RTPSADQIQQ 120 IAAKLRQYGK IEGKNVFYWF QNHKARERQK RRRILDSLSQ GLSKTGFEVA HAKNKATSSN 180 SSTLSEESIS IHRAVGSESR SDSQWIQFEE KELQQQRSST QTKPATWWQL MKPSSSPPLI 240 HFINTTTTTT DPEDQTLQLF PIRSNDHNAF NVEKNVTEVP MIGTIDTSFT PNEFFEFLPV 300 KK |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 150 | 154 | KRRRI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18010.1 | 9e-41 | WOX family protein |