PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028091194.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB

Protein Properties

Length: 239aa MW: 27007.3 Da PI: 8.506

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028091194.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.7	5.6e-18	20	65	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+W++eEd l ++v+q+G+ +W+ I+ ++ gR++k+c++rw + XP_028091194.1 20 RGSWSPEEDATLMRLVEQHGPCNWAVISTGIP-GRSGKSCRLRWINQ 65 89****************************.*********985 PP
2	Myb_DNA-binding	50.7	4e-16	74	116	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+ Ed +++a+ +G++ W+tIar ++ gRt++ +k++w++ XP_028091194.1 74 PFTPAEDAVILKAHSVYGNR-WATIARQLP-GRTDNAIKNHWNST 116 89****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 239 aa Download sequence
MKEMNNHMAE SGRGGGDKIR GSWSPEEDAT LMRLVEQHGP CNWAVISTGI PGRSGKSCRL 60 RWINQLSPAV QHRPFTPAED AVILKAHSVY GNRWATIARQ LPGRTDNAIK NHWNSTLRRR 120 SKEADAEESI SVVETEEEEE LGAKRMRFRT VVECNAAAAA AEERRRDLPK TSLTLSPPGE 180 SQAARGEVVK KNEEARIMRG DDADEREERS TVLNHRALRN MIRRMIAEEV RRYIDSDIV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G67300.1	1e-49	MYB family protein