PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028089746.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Nin-like

Protein Properties

Length: 735aa MW: 81713.3 Da PI: 6.433

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028089746.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	49.7	7.3e-16	135	176	5	46
RWP-RK 5 isledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPh 46 ++ e+l+++F + +d+A++ gv+++++KriCR++GI+RWP+ XP_028089746.1 135 LTRENLEQHFGSSREDVANSFGVSVSTMKRICRKHGISRWPF 176 899**************************************7 PP
2	RWP-RK	57.7	2.3e-18	277	326	2	51
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiks 51 e+ +s+edl+++F ++ dAAk Lgv+++++Kri Rq+GI+RWP+ k ++ XP_028089746.1 277 ENVLSFEDLQQHFGCKLDDAAKALGVSVSTVKRISRQHGIPRWPSHKKRK 326 5679****************************************987665 PP

Sequence ? help Back to Top
Protein Sequence Length: 735 aa Download sequence
MTRTFVLESI PSGLFLPPKS PKMVSIWSCL SVVKISRKIS IGLLQVLPSV QLPQTLHIVI 60 VEEKMTRLLS CSGEFISQDS SLAEERSVEI TVEVDATNNG AHGVKAYENF PIVSHSEKKN 120 MTDKLKRNYK SISVLTRENL EQHFGSSRED VANSFGVSVS TMKRICRKHG ISRWPFQPER 180 KKERLTEVIS PSMHEKHDSR LRCIQKPLHA RSSPRTIALL DGGEMVQLDS SKQQSLVEFD 240 VTTNSAHLVK ASQSCSTVSH LDETNSRETL KRKCTTENVL SFEDLQQHFG CKLDDAAKAL 300 GVSVSTVKRI SRQHGIPRWP SHKKRKVSKT DCILLEPQGE KDVSSTCSQM PTDGQTERGN 360 EMVGQLQDQN EGPNLLNTEN GSNKESITTL IFEDSVPVSE IDCILSEPEG EKNVSPTCKT 420 PIVGIVLDFI KGPNLSNTEN HSNKKRITTP TFLDSVPVFE RDCILLEPQG EKNASPTHKT 480 PTNGQTEVAN GMVGHIRDQN GIVPEFIEGP NLSNIENRSN EKSLTTPNFQ DSAPGNYPAM 540 DFSISSTYRE SGEAGGSSEL AFQPKELTQS TAYPNPDTCM FTQPHISLRE MLIENVGSSK 600 DSRNFPTSAM GFLTGGLVSE SSWTMPLCSD QAPMQTMTTI PHTMPHLTEK QDIRTVTFKA 660 QYRDKKIKFR LSLSSGIVEL KKEVTNRLGE LGIFEVHYQD NDNEWILIGC DTDVLDCFEL 720 SSSSGNEVVR LLVRD

Sequence ? help Back to Top

Protein Sequence Length: 735 aa Download sequence

MTRTFVLESI PSGLFLPPKS PKMVSIWSCL SVVKISRKIS IGLLQVLPSV QLPQTLHIVI  60
VEEKMTRLLS CSGEFISQDS SLAEERSVEI TVEVDATNNG AHGVKAYENF PIVSHSEKKN  120
MTDKLKRNYK SISVLTRENL EQHFGSSRED VANSFGVSVS TMKRICRKHG ISRWPFQPER  180
KKERLTEVIS PSMHEKHDSR LRCIQKPLHA RSSPRTIALL DGGEMVQLDS SKQQSLVEFD  240
VTTNSAHLVK ASQSCSTVSH LDETNSRETL KRKCTTENVL SFEDLQQHFG CKLDDAAKAL  300
GVSVSTVKRI SRQHGIPRWP SHKKRKVSKT DCILLEPQGE KDVSSTCSQM PTDGQTERGN  360
EMVGQLQDQN EGPNLLNTEN GSNKESITTL IFEDSVPVSE IDCILSEPEG EKNVSPTCKT  420
PIVGIVLDFI KGPNLSNTEN HSNKKRITTP TFLDSVPVFE RDCILLEPQG EKNASPTHKT  480
PTNGQTEVAN GMVGHIRDQN GIVPEFIEGP NLSNIENRSN EKSLTTPNFQ DSAPGNYPAM  540
DFSISSTYRE SGEAGGSSEL AFQPKELTQS TAYPNPDTCM FTQPHISLRE MLIENVGSSK  600
DSRNFPTSAM GFLTGGLVSE SSWTMPLCSD QAPMQTMTTI PHTMPHLTEK QDIRTVTFKA  660
QYRDKKIKFR LSLSSGIVEL KKEVTNRLGE LGIFEVHYQD NDNEWILIGC DTDVLDCFEL  720
SSSSGNEVVR LLVRD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	317	326	PRWPSHKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	3e-25	Nin-like family protein