PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028089742.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Nin-like

Protein Properties

Length: 898aa MW: 100763 Da PI: 6.4422

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028089742.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	49.3	9.3e-16	309	350	5	46
RWP-RK 5 isledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPh 46 ++ e+l+++F + +d+A++ gv+++++KriCR++GI+RWP+ XP_028089742.1 309 LTRENLEQHFGSSREDVANSFGVSVSTMKRICRKHGISRWPF 350 899**************************************7 PP
2	RWP-RK	57.3	3e-18	451	500	2	51
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiks 51 e+ +s+edl+++F ++ dAAk Lgv+++++Kri Rq+GI+RWP+ k ++ XP_028089742.1 451 ENVLSFEDLQQHFGCKLDDAAKALGVSVSTVKRISRQHGIPRWPSHKKRK 500 5679****************************************987665 PP

Sequence ? help Back to Top
Protein Sequence Length: 898 aa Download sequence
MGEEEEEQIL ERLRNQPIYS PPPSPTSVFL ISPQLYFSQP PPLSPQRHFS PPPTTSVLGF 60 SALPNFRSLV RIGLPPSRCQ IIYITVFELH EFSFSGRKDN RNLSVTILPS PLYLSQYLED 120 YAQDFGGAVD VILMFLDEIP RWWWRWRWRQ RLKLKSDLLS SLCVCEKEPD DIAEMTRTFV 180 LESIPSGLFL PPKSPKMVSI WSCLSVVKIS RKISIGLLQV LPSVQLPQTL HIVIVEEKMT 240 RLLSCSGEFI SQDSSLAEER SVEITVEVDA TNNGAHGVKA YENFPIVSHS EKKNMTDKLK 300 RNYKSISVLT RENLEQHFGS SREDVANSFG VSVSTMKRIC RKHGISRWPF QPERKKERLT 360 EVISPSMHEK HDSRLRCIQK PLHARSSPRT IALLDGGEMV QLDSSKQQSL VEFDVTTNSA 420 HLVKASQSCS TVSHLDETNS RETLKRKCTT ENVLSFEDLQ QHFGCKLDDA AKALGVSVST 480 VKRISRQHGI PRWPSHKKRK VSKTDCILLE PQGEKDVSST CSQMPTDGQT ERGNEMVGQL 540 QDQNEGPNLL NTENGSNKES ITTLIFEDSV PEGEKNVSPT CKTPIVGIVL DFIKGPNLSN 600 TENHSNKKRI TTPTFLDSVP VFERDCILLE PQGEKNASPT HKTPTNGQTE VANGMVGHIR 660 DQNGIVPEFI EGPNLSNIEN RSNEKSLTTP NFQDSAPGNY PAMDFSISST YRESGEAGGS 720 SELAFQPKEL TQSTAYPNPD TCMFTQPHIS LREMLIENVG SSKDSRNFPT SAMGFLTGGL 780 VSESSWTMPL CSDQAPMQTM TTIPHTMPHL TEKQDIRTVT FKAQYRDKKI KFRLSLSSGI 840 VELKKEVTNR LGELGIFEVH YQDNDNEWIL IGCDTDVLDC FELSSSSGNE VVRLLVRD

Sequence ? help Back to Top

Protein Sequence Length: 898 aa Download sequence

MGEEEEEQIL ERLRNQPIYS PPPSPTSVFL ISPQLYFSQP PPLSPQRHFS PPPTTSVLGF  60
SALPNFRSLV RIGLPPSRCQ IIYITVFELH EFSFSGRKDN RNLSVTILPS PLYLSQYLED  120
YAQDFGGAVD VILMFLDEIP RWWWRWRWRQ RLKLKSDLLS SLCVCEKEPD DIAEMTRTFV  180
LESIPSGLFL PPKSPKMVSI WSCLSVVKIS RKISIGLLQV LPSVQLPQTL HIVIVEEKMT  240
RLLSCSGEFI SQDSSLAEER SVEITVEVDA TNNGAHGVKA YENFPIVSHS EKKNMTDKLK  300
RNYKSISVLT RENLEQHFGS SREDVANSFG VSVSTMKRIC RKHGISRWPF QPERKKERLT  360
EVISPSMHEK HDSRLRCIQK PLHARSSPRT IALLDGGEMV QLDSSKQQSL VEFDVTTNSA  420
HLVKASQSCS TVSHLDETNS RETLKRKCTT ENVLSFEDLQ QHFGCKLDDA AKALGVSVST  480
VKRISRQHGI PRWPSHKKRK VSKTDCILLE PQGEKDVSST CSQMPTDGQT ERGNEMVGQL  540
QDQNEGPNLL NTENGSNKES ITTLIFEDSV PEGEKNVSPT CKTPIVGIVL DFIKGPNLSN  600
TENHSNKKRI TTPTFLDSVP VFERDCILLE PQGEKNASPT HKTPTNGQTE VANGMVGHIR  660
DQNGIVPEFI EGPNLSNIEN RSNEKSLTTP NFQDSAPGNY PAMDFSISST YRESGEAGGS  720
SELAFQPKEL TQSTAYPNPD TCMFTQPHIS LREMLIENVG SSKDSRNFPT SAMGFLTGGL  780
VSESSWTMPL CSDQAPMQTM TTIPHTMPHL TEKQDIRTVT FKAQYRDKKI KFRLSLSSGI  840
VELKKEVTNR LGELGIFEVH YQDNDNEWIL IGCDTDVLDC FELSSSSGNE VVRLLVRD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	491	500	PRWPSHKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	8e-25	Nin-like family protein