PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028089741.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Nin-like

Protein Properties

Length: 902aa MW: 101192 Da PI: 6.2252

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028089741.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	49.3	9.3e-16	302	343	5	46
RWP-RK 5 isledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPh 46 ++ e+l+++F + +d+A++ gv+++++KriCR++GI+RWP+ XP_028089741.1 302 LTRENLEQHFGSSREDVANSFGVSVSTMKRICRKHGISRWPF 343 899**************************************7 PP
2	RWP-RK	57.3	3e-18	444	493	2	51
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiks 51 e+ +s+edl+++F ++ dAAk Lgv+++++Kri Rq+GI+RWP+ k ++ XP_028089741.1 444 ENVLSFEDLQQHFGCKLDDAAKALGVSVSTVKRISRQHGIPRWPSHKKRK 493 5679****************************************987665 PP

Sequence ? help Back to Top
Protein Sequence Length: 902 aa Download sequence
MGEEEEEQIL ERLRNQPIYS PPPSPTSVFL ISPQLYFSQP PPLSPQRHFS PPPTTSVLGF 60 SALPNFRSLV RIGLPPSRCQ IIYITVFELH EFSFSGRKDN RNLSVTILQY LEDYAQDFGG 120 AVDVILMFLD EIPRWWWRWR WRQRLKLKSD LLSSLCVCEK EPDDIAEMTR TFVLESIPSG 180 LFLPPKSPKM VSIWSCLSVV KISRKISIGL LQVLPSVQLP QTLHIVIVEE KMTRLLSCSG 240 EFISQDSSLA EERSVEITVE VDATNNGAHG VKAYENFPIV SHSEKKNMTD KLKRNYKSIS 300 VLTRENLEQH FGSSREDVAN SFGVSVSTMK RICRKHGISR WPFQPERKKE RLTEVISPSM 360 HEKHDSRLRC IQKPLHARSS PRTIALLDGG EMVQLDSSKQ QSLVEFDVTT NSAHLVKASQ 420 SCSTVSHLDE TNSRETLKRK CTTENVLSFE DLQQHFGCKL DDAAKALGVS VSTVKRISRQ 480 HGIPRWPSHK KRKVSKTDCI LLEPQGEKDV SSTCSQMPTD GQTERGNEMV GQLQDQNEGP 540 NLLNTENGSN KESITTLIFE DSVPVSEIDC ILSEPEGEKN VSPTCKTPIV GIVLDFIKGP 600 NLSNTENHSN KKRITTPTFL DSVPVFERDC ILLEPQGEKN ASPTHKTPTN GQTEVANGMV 660 GHIRDQNGIV PEFIEGPNLS NIENRSNEKS LTTPNFQDSA PGNYPAMDFS ISSTYRESGE 720 AGGSSELAFQ PKELTQSTAY PNPDTCMFTQ PHISLREMLI ENVGSSKDSR NFPTSAMGFL 780 TGGLVSESSW TMPLCSDQAP MQTMTTIPHT MPHLTEKQDI RTVTFKAQYR DKKIKFRLSL 840 SSGIVELKKE VTNRLGELGI FEVHYQDNDN EWILIGCDTD VLDCFELSSS SGNEVVRLLV 900 RD

Sequence ? help Back to Top

Protein Sequence Length: 902 aa Download sequence

MGEEEEEQIL ERLRNQPIYS PPPSPTSVFL ISPQLYFSQP PPLSPQRHFS PPPTTSVLGF  60
SALPNFRSLV RIGLPPSRCQ IIYITVFELH EFSFSGRKDN RNLSVTILQY LEDYAQDFGG  120
AVDVILMFLD EIPRWWWRWR WRQRLKLKSD LLSSLCVCEK EPDDIAEMTR TFVLESIPSG  180
LFLPPKSPKM VSIWSCLSVV KISRKISIGL LQVLPSVQLP QTLHIVIVEE KMTRLLSCSG  240
EFISQDSSLA EERSVEITVE VDATNNGAHG VKAYENFPIV SHSEKKNMTD KLKRNYKSIS  300
VLTRENLEQH FGSSREDVAN SFGVSVSTMK RICRKHGISR WPFQPERKKE RLTEVISPSM  360
HEKHDSRLRC IQKPLHARSS PRTIALLDGG EMVQLDSSKQ QSLVEFDVTT NSAHLVKASQ  420
SCSTVSHLDE TNSRETLKRK CTTENVLSFE DLQQHFGCKL DDAAKALGVS VSTVKRISRQ  480
HGIPRWPSHK KRKVSKTDCI LLEPQGEKDV SSTCSQMPTD GQTERGNEMV GQLQDQNEGP  540
NLLNTENGSN KESITTLIFE DSVPVSEIDC ILSEPEGEKN VSPTCKTPIV GIVLDFIKGP  600
NLSNTENHSN KKRITTPTFL DSVPVFERDC ILLEPQGEKN ASPTHKTPTN GQTEVANGMV  660
GHIRDQNGIV PEFIEGPNLS NIENRSNEKS LTTPNFQDSA PGNYPAMDFS ISSTYRESGE  720
AGGSSELAFQ PKELTQSTAY PNPDTCMFTQ PHISLREMLI ENVGSSKDSR NFPTSAMGFL  780
TGGLVSESSW TMPLCSDQAP MQTMTTIPHT MPHLTEKQDI RTVTFKAQYR DKKIKFRLSL  840
SSGIVELKKE VTNRLGELGI FEVHYQDNDN EWILIGCDTD VLDCFELSSS SGNEVVRLLV  900
RD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	484	493	PRWPSHKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	8e-25	Nin-like family protein