PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_028089083.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 351aa MW: 39829.7 Da PI: 5.1136 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.2 | 1.7e-17 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEde+l+ +++++G+g +W + ++++g++R++k+c++rw++yl XP_028089083.1 14 KGPWSPEEDEKLKAYIEKYGTGnNWIALPQKIGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP | |||||||
2 | Myb_DNA-binding | 37.7 | 4.8e-12 | 69 | 111 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eEd ++ + G++ W+ Ia+ ++ gRt++++k++w++ XP_028089083.1 69 GGFSEEEDNIICSLYISIGSR-WSIIAAQLP-GRTDNDVKNYWNT 111 569******************.*********.***********97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 351 aa Download sequence |
MGRAPCCDKA NVKKGPWSPE EDEKLKAYIE KYGTGNNWIA LPQKIGLKRC GKSCRLRWLN 60 YLRPNIKHGG FSEEEDNIIC SLYISIGSRW SIIAAQLPGR TDNDVKNYWN TRLKKKLLGR 120 RKQSNVNRLS STSHDPKDEN GSLDDSCEPV LSNSALERLQ LHMQLQSCQN PLSFYNNPAL 180 WPKLQPLQEK LIQSLQFLNE NTNYTLMQQH VLPSTQPGQE YKIDFYEPPN TSVIDGLNID 240 ELENSLNAFN AGSNQVVMEQ SNNEGIQAVS IFQADLDDLL HNKTIGLPPQ EEDPIAEFDC 300 FKAMDSSKDS MMWWSNDFEL KSASTNSWDS SSPVLQSHGM CQDYGLGYNL Q |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G57620.1 | 2e-94 | MYB family protein |