PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028089038.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MYB | ||||||||
Protein Properties | Length: 329aa MW: 36725.8 Da PI: 7.8768 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50.1 | 6.2e-16 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg+W +eEd +l+++++++G+g +W + +++ g++R++k+c++rw++yl XP_028089038.1 14 RGPWAPEEDAKLKEYIEKHGTGgNWIALPQKAGLRRCGKSCRLRWLNYL 62 89*********************************************97 PP | |||||||
2 | Myb_DNA-binding | 34.2 | 6e-11 | 69 | 111 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g ++ Ed ++ +++ G++ W+ Ia+ ++ gRt++++k++w++ XP_028089038.1 69 GEFSDNEDRIICTLFASIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 78999****************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 329 aa Download sequence |
MGRAPCCDKE NVKRGPWAPE EDAKLKEYIE KHGTGGNWIA LPQKAGLRRC GKSCRLRWLN 60 YLRPNIKHGE FSDNEDRIIC TLFASIGSRW SIIAAQLPGR TDNDIKNYWN TKLKKKLMKI 120 GIGIVPSSPN QRRPHHHQPT TYPFISLLHH NSSSSPSPSP SSPLSSSSSY KYHNTQTSSF 180 IGYDFEPFSI PSSSTANSTV LQAQEVYVSP NLLFGGEAAS CSSSDGSFNS NNQISHGREM 240 ESDYGGHMGL QSYYHLYNGV GENLKYMVSS GVGGGNANNG LFYGGESETP IDYSSVEEIK 300 QLINTNTNIY NNMNFYVDDN QREEKLMYY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57620.1 | 3e-70 | MYB family protein |