PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028085660.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB

Protein Properties

Length: 483aa MW: 54447.8 Da PI: 6.0906

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028085660.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	44.8	2.9e-14	25	69	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +W++eEd++l + ++ +G+++W+ Ia+++ +t qc+ rw++yl XP_028085660.1 25 SWSQEEDDILREQIRIHGTENWTIIASKFK-DKTTRQCRRRWYTYL 69 6**************************9.***********97 PP
2	Myb_DNA-binding	44.9	2.7e-14	75	118	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g W++eEd+ll +a k +G++ W+ Ia+ + gRt++ +k+r+ + XP_028085660.1 75 KGGWSPEEDLLLCEAQKIFGNR-WTEIAKVVS-GRTDNAVKNRFST 118 688*****************.*****.********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 483 aa Download sequence
MQNMKKNKST SNEEVPKLKE RHIVSWSQEE DDILREQIRI HGTENWTIIA SKFKDKTTRQ 60 CRRRWYTYLN SDFKKGGWSP EEDLLLCEAQ KIFGNRWTEI AKVVSGRTDN AVKNRFSTLC 120 KKRAKHEALA KENNTSYINP NNKRVIFPNG SSTAGISENA TPLKKLRRTH ISDLTENCTR 180 GERLLEECGT TRSQQLRPPF SVLQQNLHNV GDLPTQNHIN TTKEISNDAS SYKIQGTFLK 240 RDDPKIFALM QQAELLSSLA VKVNTENMDQ SLANTWKVLQ DFLNQNRGSD MLGISISDMD 300 FQLENFKDLV EDLRSSSEGS HPSWRQPDLY EESPDSSEYS TGSTLLSQTA GDKMEESREE 360 LCALHLDSVA ESQSTHIGDQ IFIGDCENGI LSGAITNQDM LPSCEDLKDR DGVISVFSST 420 EYGSPLQVTP IFRSLAAGVP SPKFSESERQ FLLKALGMDS QSSNPSTNYS QPPSCKRALL 480 QSL

Sequence ? help Back to Top

Protein Sequence Length: 483 aa Download sequence

MQNMKKNKST SNEEVPKLKE RHIVSWSQEE DDILREQIRI HGTENWTIIA SKFKDKTTRQ  60
CRRRWYTYLN SDFKKGGWSP EEDLLLCEAQ KIFGNRWTEI AKVVSGRTDN AVKNRFSTLC  120
KKRAKHEALA KENNTSYINP NNKRVIFPNG SSTAGISENA TPLKKLRRTH ISDLTENCTR  180
GERLLEECGT TRSQQLRPPF SVLQQNLHNV GDLPTQNHIN TTKEISNDAS SYKIQGTFLK  240
RDDPKIFALM QQAELLSSLA VKVNTENMDQ SLANTWKVLQ DFLNQNRGSD MLGISISDMD  300
FQLENFKDLV EDLRSSSEGS HPSWRQPDLY EESPDSSEYS TGSTLLSQTA GDKMEESREE  360
LCALHLDSVA ESQSTHIGDQ IFIGDCENGI LSGAITNQDM LPSCEDLKDR DGVISVFSST  420
EYGSPLQVTP IFRSLAAGVP SPKFSESERQ FLLKALGMDS QSSNPSTNYS QPPSCKRALL  480
QSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02820.2	1e-176	MYB family protein