PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_028085256.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
|
||||||||
Family | TCP | ||||||||
Protein Properties | Length: 150aa MW: 16784.9 Da PI: 6.9572 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 74.3 | 3.6e-23 | 24 | 93 | 3 | 70 |
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.....ssssa 70 +k ++++++h kv+gR+RR+R+++ ca ++F L + LG+ + ++tieW l+qa+p + + ++ + + XP_028085256.1 24 KKPSKSKDRHLKVNGRGRRIRIPIVCAQQVFRLNQILGHRTSGQTIEWILKQAEPTVTNILDNattvpP---S 93 5678899***************************************************99998653332...2 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 150 aa Download sequence |
MSPSTSSNHL SATIPTTTSQ PTHKKPSKSK DRHLKVNGRG RRIRIPIVCA QQVFRLNQIL 60 GHRTSGQTIE WILKQAEPTV TNILDNATTV PPSDPSSLAP SVAKESPTPL ENRDFEVTEP 120 GFLSVQDYDV LVNYEDDFFV NEFANMPMYF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G08330.1 | 3e-24 | TCP family protein |