PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028084677.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

WOX

Protein Properties

Length: 264aa MW: 29098.4 Da PI: 8.7476

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028084677.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	63.9	2.2e-20	72	131	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++tkeq++ Le+l+++ r+p+ae++++++ +l +++ ++V++WFqN++a++++ XP_028084677.1 72 SRWNPTKEQITLLENLYKQgIRTPTAEQIQQITGRLksfgHIEGKNVFYWFQNHKARQRQ 131 7***************99************************************97 PP
2	Wus_type_Homeobox	114.3	6.2e-37	70	133	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 a++RW+Pt+eQi++Le+lyk+G+rtP++e+iq+it +L+++G+ie+kNVfyWFQN+kaR+rqkq XP_028084677.1 70 ASSRWNPTKEQITLLENLYKQGIRTPTAEQIQQITGRLKSFGHIEGKNVFYWFQNHKARQRQKQ 133 689***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 264 aa Download sequence
MFCTKINMHV KFSSLSLSLS QMTTKTMQKK YTNHQYFLGF LFYPKTLVKM EGGSESAVVD 60 VSTSGRATPA SSRWNPTKEQ ITLLENLYKQ GIRTPTAEQI QQITGRLKSF GHIEGKNVFY 120 WFQNHKARQR QKQKQESLAY FNRYLHKASN VFPPPCPNGC LKTSGGGVGI ESAPLSYNTT 180 DHDGLITGDN NSNSKQETLP LFPLEPTGIL QARTTSSSLA STSAENSTAT PSSSSDTTGI 240 EEGGFGDQPF IDFFSGNNGN YESD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G59340.1	2e-52	WOX family protein