PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028084064.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

TCP

Protein Properties

Length: 333aa MW: 34886.9 Da PI: 9.1046

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028084064.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	122	6.9e-38	76	166	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg...k 89 a+k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti+WLlqqa+p+i+++tgt++ +as+ a+ s+s++ ss++ + XP_028084064.1 76 APKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTMPASALAAAGGSVSQHGSSISvglH 166 789******************************************************************8886666666665555554441 PP

Sequence ? help Back to Top
Protein Sequence Length: 333 aa Download sequence
MDPKVSKQPP QTQAQTQGMM MMPDFLSLPQ PNTSSNSNNN NNNNNMGVED NKPAEIKDFQ 60 IVIADKELEA SKKQLAPKRS SNKDRHTKVE GRGRRIRMPA LCAARIFQLT RELGHKSDGE 120 TIQWLLQQAE PSIIAATGTG TMPASALAAA GGSVSQHGSS ISVGLHQKME ELGGHIGGSG 180 GRTSWPMVAL GGNLGRTHMA TTGGIWPSGV GGFGFQSSSG PSTANLASES SNYLQKIGFP 240 GFELPAATNM GPMSFTSILG GVAAAASAGG GSSSQHHLPG LELGLSQDGH IGVLNPQALS 300 QIYQQMGQAR MQQQHQHQQQ PSSKDDSQGS GGQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27010.1	3e-67	TCP family protein