PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028082131.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | Nin-like | ||||||||
Protein Properties | Length: 319aa MW: 35644.5 Da PI: 7.0317 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 45.9 | 1.1e-14 | 140 | 184 | 4 | 48 |
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRk 48 ei l+d+ ++ +++i+ AA +L+v+ ++LKr CR yG +RWP Rk XP_028082131.1 140 EIPLDDILQNSKKSIEVAADNLEVSRSTLKRVCRGYGFPRWPPRK 184 688999**************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 319 aa Download sequence |
MKLTATDYSP SNKDYYANQQ TGLRKILETM KKNFLTFKLA SGEELGGHLY IEEIPFQNGE 60 KIDSVQMPQT TKSLSRLEPL QSGGEMSQLD LLNQQSMDAL NNGSNVVSAE RSNIDVTCLQ 120 EKGKTKRPKR VHNKTGVKIE IPLDDILQNS KKSIEVAADN LEVSRSTLKR VCRGYGFPRW 180 PPRKKNMVGS SQPSESSPGV DHQQIPQLSY DQPFSQVSAI VVHANPCTTV IRDANIVTVK 240 AKYINDIIIK FLLSLSSGLV ELQQQITNRL HLEDGTYYVK YKDEDDDLIV IACDQDLQDY 300 ISSSTSPGST TIMVFIVPK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24020.1 | 2e-13 | Nin-like family protein |