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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028080447.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | AP2 | ||||||||
Protein Properties | Length: 255aa MW: 29126.8 Da PI: 9.9673 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 49.8 | 8.3e-16 | 102 | 161 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g ++ ++++lg ++ + +Aa+a++ a++k++g XP_028080447.1 102 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqsRKgRQVYLGGYDMEAKAARAYDLAALKYWG 161 78*******************988886678446**********99*************98 PP | |||||||
2 | AP2 | 22.8 | 2.2e-07 | 206 | 236 | 3 | 36 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkf 36 y+GV+++++ grW A+I + +k +lg+f XP_028080447.1 206 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTF 236 9***************988532...5*******9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 255 aa Download sequence |
MAEDDFSVMK NWVSRNYYPA SHALDNGVES GSMSALGYWD LESLSLSMSP GSQSSCVTGS 60 QQISPTVTEC VAMEGKKRGS EKLDQKQVVH RKSIDTFGQR TSQYRGVTRH RWTGRYEAHL 120 WDNSCKKEGQ SRKGRQVYLG GYDMEAKAAR AYDLAALKYW GPSTHINFPL ENYQQELEHM 180 KNMTRQEYVA HLRRKSSGFS RGASMYRGVT RHHQHGRWQA RIGRVAGNKD LYLGTFSEFL 240 CIFSIYLGKN LKLNK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37750.1 | 2e-92 | AP2 family protein |