PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028079714.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | Nin-like | ||||||||
Protein Properties | Length: 216aa MW: 24109.2 Da PI: 9.3584 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 45.8 | 1.2e-14 | 36 | 80 | 4 | 48 |
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRk 48 ei l+d+ ++ +i+ AA +L+v+ ++LKr+CR yG +RWP Rk XP_028079714.1 36 EIPLDDILQNSRESIQVAADSLQVSRSTLKRACRGYGFPRWPPRK 80 6889999999**********************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 216 aa Download sequence |
MTQLDSSNQQ SMDALNNGSN SQKKGKTKRP KRVKIEIPLD DILQNSRESI QVAADSLQVS 60 RSTLKRACRG YGFPRWPPRK KNMVGSSQPS ESSPGVDHQQ IPQLSSDQPF SQASATVFHA 120 NPRNTVIRDA NVVTVKAKYI NDIIIKFPLS LSSGLVELQQ QIAKRLHLED GTYCVKYKDE 180 VDDLIVIPCD QNLQDYISNY TSSGSTIHCS KVVNYQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24020.1 | 1e-12 | Nin-like family protein |