PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028077295.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

WOX

Protein Properties

Length: 172aa MW: 19461.4 Da PI: 9.5463

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028077295.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	65	1e-20	7	66	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eql +Lee++ r+p+a+++++++++l +++ ++V++WFqN++a++++ XP_028077295.1 7 SRWCPTPEQLMILEEMYIGgMRTPNASQIQQITAHLslygKIEGKNVFYWFQNHKARDRQ 66 7***************99***********************************996 PP
2	Wus_type_Homeobox	118.8	2.5e-38	6	67	3	64
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 ++RW+PtpeQ++iLee+y G+rtPn+++iq+ita+L+ yGkie+kNVfyWFQN+kaR+rqk XP_028077295.1 6 SSRWCPTPEQLMILEEMYIGGMRTPNASQIQQITAHLSLYGKIEGKNVFYWFQNHKARDRQK 67 79***********************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 172 aa Download sequence
MSPAGSSRWC PTPEQLMILE EMYIGGMRTP NASQIQQITA HLSLYGKIEG KNVFYWFQNH 60 KARDRQKLRR KLTKHHHHHH QNLQSPPPLP SQHSSIGFLP QGGEVEDAST QMVTSKPMVM 120 RSYGRDWMVM LDVVPTPITP CCNTAPPKTL ELFPITATGL KDMHFPSSMS SN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28610.1	8e-37	WOX family protein