PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028075817.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family Nin-like
Protein Properties Length: 268aa    MW: 30000.1 Da    PI: 8.6199
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028075817.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK57.52.7e-1868116452
          RWP-RK   4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                     +i +ed+ ++ +l++++AAk+L+v+ ++LK  CR  GI+RWP Rki+++
  XP_028075817.1  68 KIPVEDILQNSELSLENAAKSLKVSKSTLKHVCRTCGIERWPPRKINKV 116
                     68899******************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
MQVDSSYQQL GNTINTGRNV GDTEHNNFAI TCTQEKSTVK VSKGKCNKSG GTVKASKRDA  60
NNIGVKIKIP VEDILQNSEL SLENAAKSLK VSKSTLKHVC RTCGIERWPP RKINKVGCSQ  120
LDESAPCVNS DHLPSTQSSA TAVHIESYDK TMQDANNVTI KEKYGEGITM KFRLSLSSRF  180
IQLQQEVAKR LNLKARTYYV KYEDEDGELI LIGCDEDLQD YMRDSRSLGR SSIVVLLEQM  240
LPIADHEKKQ KQKQKKSCQL PPEQLESC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24020.12e-14Nin-like family protein