PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028075787.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | AP2 | ||||||||
Protein Properties | Length: 130aa MW: 15055.1 Da PI: 10.0192 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 48.4 | 2.3e-15 | 40 | 90 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgt.aeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k f+lg+f eeAaka++ a+ k++g XP_028075787.1 40 YRGVTRHHQHGRWQARIGRVAG---NKDFYLGTFSDtQEEAAKAYDIAAIKFHG 90 9***************988532...5********776**************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 130 aa Download sequence |
MVKLENYQQE LEHMKNMTRQ EYVAHLRRKS SGFSRGASMY RGVTRHHQHG RWQARIGRVA 60 GNKDFYLGTF SDTQEEAAKA YDIAAIKFHG VSAITNFDLM GIVNSMYPEQ LTRLSCELQL 120 FMSSRRAYSL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37750.1 | 1e-54 | AP2 family protein |