PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028075247.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

TCP

Protein Properties

Length: 351aa MW: 36671.6 Da PI: 7.4206

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028075247.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	114.5	1.4e-35	78	183	3	112
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg..kaaksa 94 k++ ++++hTkv+gR+RR+R++a caar+F+L++eLG+++d++t+ WLl+ a+pai e+tgt++ +a ++ + s +++ +++ XP_028075247.1 78 IKRSATKDRHTKVEGRGRRIRMPAACAARIFQLTRELGHKSDGETVKWLLERAEPAIFEATGTGTVPAIAVsV----NGS---LKIPttPPTTTE 165 58999**********************************************************9999955521....111...222222122222 PP TCP 95 akskksqksaasalnlak 112 a+ k++++ a+++++ + XP_028075247.1 166 AQAAKKKRKRACTSEFID 183 233333333333444444 PP

Sequence ? help Back to Top
Protein Sequence Length: 351 aa Download sequence
MASIEKQSID EATKIVSSDP LLGDSSEFTI TEVTPPIVVP SLKDEPTDSE LEGSITVGVV 60 PESNQSNQMI EKSKVGKIKR SATKDRHTKV EGRGRRIRMP AACAARIFQL TRELGHKSDG 120 ETVKWLLERA EPAIFEATGT GTVPAIAVSV NGSLKIPTTP PTTTEAQAAK KKRKRACTSE 180 FIDVDDSAPA PAPAPSNFAP VTTMTPQRLL PVWAVAGGGA PPNAFFMIPP PGTAIAGPSN 240 QPQIWSIPAG AMPMFNVSAR PVSNYVSAMQ PGLSFGVAVG GGGEVQAPVG SVSNSASGEK 300 SGKVSTMAPS SSSTTTATTT TTTQMLRDFS LEIYDKKELQ FMVSSGGDQA A

Sequence ? help Back to Top

Protein Sequence Length: 351 aa Download sequence

MASIEKQSID EATKIVSSDP LLGDSSEFTI TEVTPPIVVP SLKDEPTDSE LEGSITVGVV  60
PESNQSNQMI EKSKVGKIKR SATKDRHTKV EGRGRRIRMP AACAARIFQL TRELGHKSDG  120
ETVKWLLERA EPAIFEATGT GTVPAIAVSV NGSLKIPTTP PTTTEAQAAK KKRKRACTSE  180
FIDVDDSAPA PAPAPSNFAP VTTMTPQRLL PVWAVAGGGA PPNAFFMIPP PGTAIAGPSN  240
QPQIWSIPAG AMPMFNVSAR PVSNYVSAMQ PGLSFGVAVG GGGEVQAPVG SVSNSASGEK  300
SGKVSTMAPS SSSTTTATTT TTTQMLRDFS LEIYDKKELQ FMVSSGGDQA A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G51910.2	1e-62	TCP family protein