PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028074683.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB

Protein Properties

Length: 492aa MW: 55644.1 Da PI: 7.0318

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028074683.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	43.5	7.3e-14	23	67	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +W++eEd++l + ++ +G+++W+ Ia+++ ++ qc+ rw++yl XP_028074683.1 23 SWSQEEDDILRNQIRTHGTENWAIIASKFK-DKSTRQCRRRWYTYL 67 6**************************9.***********97 PP
2	Myb_DNA-binding	43.9	5.6e-14	73	116	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g W++eEd+ll +a k +G++ W+ Ia+ + gRt++ +k+r+ + XP_028074683.1 73 KGGWSPEEDLLLCEAQKVFGNR-WTEIAKVVS-GRTDNAVKNRFST 116 688*****************.*****.********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 492 aa Download sequence
MHKTMKKNNT DQLPKPKERH IVSWSQEEDD ILRNQIRTHG TENWAIIASK FKDKSTRQCR 60 RRWYTYLNSD FKKGGWSPEE DLLLCEAQKV FGNRWTEIAK VVSGRTDNAV KNRFSTLCKK 120 RAKHEALVKE NNNTSYINPN NKRVIFRNGF NTAGISETAT PMKKMRRTDI SDLMENYNHG 180 ERLPRECQTT ANQQLRPPFA VLVQNFHNVG NLPTQNHVNN TKEMSKDEAA SNNKIQGTFL 240 KKDDPKIFAL MQQAELLSSL AVKVNSENTH QSLENAWKVL QDFLNQTKGN DMLGIKISDI 300 DFQLENFRDL IEDLRNNNEG SRQSWRQPDL YEESPGSSEY STGSTLLSQT AGDKTEQSQD 360 ELCALHQDSI AESQSTRIGE QNGIGDCENG ILSGATTTED MLPSCNDQKD NDGVIPKDHD 420 GIIPAFSNTE FSSPLQVTPI FRSLAAGIPS PKFSESERQF LLKTLGMESP SCNPNNNTSQ 480 PPLCKRALLQ SL

Sequence ? help Back to Top

Protein Sequence Length: 492 aa Download sequence

MHKTMKKNNT DQLPKPKERH IVSWSQEEDD ILRNQIRTHG TENWAIIASK FKDKSTRQCR  60
RRWYTYLNSD FKKGGWSPEE DLLLCEAQKV FGNRWTEIAK VVSGRTDNAV KNRFSTLCKK  120
RAKHEALVKE NNNTSYINPN NKRVIFRNGF NTAGISETAT PMKKMRRTDI SDLMENYNHG  180
ERLPRECQTT ANQQLRPPFA VLVQNFHNVG NLPTQNHVNN TKEMSKDEAA SNNKIQGTFL  240
KKDDPKIFAL MQQAELLSSL AVKVNSENTH QSLENAWKVL QDFLNQTKGN DMLGIKISDI  300
DFQLENFRDL IEDLRNNNEG SRQSWRQPDL YEESPGSSEY STGSTLLSQT AGDKTEQSQD  360
ELCALHQDSI AESQSTRIGE QNGIGDCENG ILSGATTTED MLPSCNDQKD NDGVIPKDHD  420
GIIPAFSNTE FSSPLQVTPI FRSLAAGIPS PKFSESERQF LLKTLGMESP SCNPNNNTSQ  480
PPLCKRALLQ SL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02820.2	0.0	MYB family protein