PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028069761.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | TCP | ||||||||
Protein Properties | Length: 238aa MW: 25412.4 Da PI: 10.8071 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 110.5 | 2.4e-34 | 10 | 115 | 3 | 112 |
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg..kaaksa 94 k++ ++++hTkv+gR+RR+R++a caar+F+L++eLG+++d++t+ WLl+ ak ai e+ gt++++a ++ ++s +++ +++ XP_028069761.1 10 IKRSATKDRHTKVEGRGRRIRMPAACAARIFQLTRELGHKSDGETVKWLLERAKLAIFEAIGTGTIPAIAVsVNGS-------LKIPttPPTTTE 97 58999***********************************************************999955521112.......222222222222 PP TCP 95 akskksqksaasalnlak 112 a+ k++++ a+++++ + XP_028069761.1 98 AQAAKKKRKRACTSEFID 115 233444444444444444 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 238 aa Download sequence |
MIEKSKVGKI KRSATKDRHT KVEGRGRRIR MPAACAARIF QLTRELGHKS DGETVKWLLE 60 RAKLAIFEAI GTGTIPAIAV SVNGSLKIPT TPPTTTEAQA AKKKRKRACT SEFIDVSDSA 120 PAPAPSNFAL VTTMTPQRLL PVWAVAGGGA PPNAFFMIPP PGTAIAGPSN QPQIWSIPAG 180 AMPMFNVSAR PVSNYVSAIS TTTATTTTTT QMLRDFSLEI YDKKELQFMV SSGGDQAA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51910.2 | 7e-66 | TCP family protein |