PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028068607.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MYB | ||||||||
Protein Properties | Length: 225aa MW: 24997.8 Da PI: 8.3305 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.8 | 5.3e-18 | 32 | 77 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W+ eEd++l ++v ++G ++W++I++++ gR++k+c++rw + XP_028068607.1 32 KGPWSSEEDKILTRLVDRYGARNWSLISKYIK-GRSGKSCRLRWCNQ 77 79*****************************9.***********985 PP | |||||||
2 | Myb_DNA-binding | 55.7 | 1.1e-17 | 86 | 128 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++++ Ede ++ a+ q+G++ W+tIar ++ gRt++ +k++w++ XP_028068607.1 86 PFSQAEDETILAAHSQYGNR-WATIARLLP-GRTDNAVKNHWNST 128 79******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 225 aa Download sequence |
MEAFNRCSSV TSSSSDSSSS DHSMSNRAEK IKGPWSSEED KILTRLVDRY GARNWSLISK 60 YIKGRSGKSC RLRWCNQLSP NVEHRPFSQA EDETILAAHS QYGNRWATIA RLLPGRTDNA 120 VKNHWNSTLK RRQQQPMERM DGGDLVVGGG GSSSGSGSFV NMNTDESDPM TTLSLAPPGV 180 GGCGMPERRR GEEVPAEFWD VMREVIAREV RDYVTTSFPE ASGFR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G67300.1 | 2e-56 | MYB family protein |