PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028068255.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family ARR-B
Protein Properties Length: 678aa    MW: 74582.7 Da    PI: 5.716
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028068255.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like91.38.2e-29210263155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     kpr++W+ eLH++Fv av+qL G++kA+Pk+ilelm+v+gLt+e+v+SHLQkYRl
  XP_028068255.1 210 KPRVVWSVELHQQFVAAVNQL-GIDKAVPKKILELMNVPGLTRENVASHLQKYRL 263
                     79*******************.********************************8 PP
2Myb_DNA-binding42.61.4e-13212262148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r  W+ e+++++v av+qlG +   +k+I + m+  g+t++++ s++qky+
   XP_028068255.1 212 RVVWSVELHQQFVAAVNQLGIDkaVPKKILELMNvPGLTRENVASHLQKYR 262
                      678***********************************************7 PP
3Response_reg73.96.3e-25341421109
                     EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS
    Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 
                     vl+vdD+p+ +++l+++l +  y ev+ +  +e al ll+e++  +D+++ D+ mp+mdG++ll++i  e  +lp+i+++a + ++ + + +  G
  XP_028068255.1  34 VLVVDDDPTCLMILEKMLLNCLY-EVTKCNRAEMALSLLRENKngYDIVISDVHMPDMDGFKLLEHIGLEM-DLPVIMMSADDGKSVVMKGVTHG 126
                     89*********************.***************999999**********************6654.8********************** PP

                     ESEEEESS--HHHHHH CS
    Response_reg  94 akdflsKpfdpeelvk 109
                     a d+l Kp+ +e+l +
  XP_028068255.1 127 ACDYLIKPVRIEALKN 142
                     ************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 678 aa     Download sequence    
MNLVSQTAKS MSMPNSSVSW KSGEPDPFPA GLRVLVVDDD PTCLMILEKM LLNCLYEVTK  60
CNRAEMALSL LRENKNGYDI VISDVHMPDM DGFKLLEHIG LEMDLPVIMM SADDGKSVVM  120
KGVTHGACDY LIKPVRIEAL KNIWQHVVRK RKHEWKDIEQ SGSIEDGEQQ QKQTDDADFS  180
SSANEGSWRK RRKDEEDQVE DRDDTSALKK PRVVWSVELH QQFVAAVNQL GIDKAVPKKI  240
LELMNVPGLT RENVASHLQK YRLYLRRLSG VSQHQSGLNN SFGGPPDATF GSVSSFNGLD  300
LQALATTGQI PAQSLATLQA AALGRSTTKS GISVPLMDQR NLFSFEGPKL RFGEGSQQPQ  360
QSNNNNKQIN LLHGIPTTME PKQLANLHQS AQQSFRGMNM QVNNARGNQN SSLLVQMSQP  420
PQSRPQILND TNVNHLSRLP SSLPQPTLSG GMPSSAAFAR NGMVDNARGA VYNSVSQASS  480
MVDFSITQNT DLPGNSFPLA NNPSAITSKG VLQEEVNSEM KGSRGFAPSY DIFSDLHQHK  540
SQDWELQNVG LAFNASQHSN MQGCLDVQPS VLVHQGFSSN QNSLQNRNTS VGKVMFSAGE  600
ESGHGNAHNI DQQLNTFVAD NSFIKAESLP EASCQNMLFP EQFTQEDLMS ILLKQQEGLG  660
QVANEFGFDG YPLDDLPV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1189194RKRRKD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.10.0ARR-B family protein