PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028067460.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

WRKY

Protein Properties

Length: 589aa MW: 63901.2 Da PI: 7.0207

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028067460.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.7	1.6e-30	322	380	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+ XP_028067460.1 322 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEDRTILITTYEGTHNHP 380 7*********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 589 aa Download sequence
MDKGWGLTLD SDSIGFFPNK PAGLSLTPRL NRSRGGMFSG IEFPVRLNRR EEQHTALQPS 60 DENRTVVNEV DFFCDKKKST KEDDYMDSKA SISRVKKENS HETGPGMDLD VNTGLHLRTT 120 NTESDLSTVD DGISSHVEDK RAKIEMAVLQ AEVERMNAEN QRLRGMLSQV SNNYSALQLH 180 LITLMQQQQQ QQQQQSSRAE ATHQHEILEA RSEDKKHEGG GGPVVPRQFM DLGPSATAET 240 DDQPSHSSSE ERTQSASPHP NNNKKDMVPL VGREESPESE GWVPNKVPKL NPSKTNVDQA 300 TEATMRKARV SVRARSEAPM ITDGCQWRKY GQKMAKGNPC PRAYYRCTMA VGCPVRKQVQ 360 RCAEDRTILI TTYEGTHNHP LPPAAMAMAS TTSAAASMLL SGSMSSADGL MNPNFLARAI 420 LPSSSSMATI SASAPFPTVT LDLTHTSPNP LQFQRPPTQF PVPFASVPTP PQPAAHVFGQ 480 ALYNQSKFSG LQLSQDIDAA QLGHQAPPPQ LHHQQPPPNH SSFADTLSAA TAAITADPNF 540 TAALAAAITS IMGGGQQPNS NNPTTTASTT TTTNTTTSNS NKIGSFPVN

Sequence ? help Back to Top

Protein Sequence Length: 589 aa Download sequence

MDKGWGLTLD SDSIGFFPNK PAGLSLTPRL NRSRGGMFSG IEFPVRLNRR EEQHTALQPS  60
DENRTVVNEV DFFCDKKKST KEDDYMDSKA SISRVKKENS HETGPGMDLD VNTGLHLRTT  120
NTESDLSTVD DGISSHVEDK RAKIEMAVLQ AEVERMNAEN QRLRGMLSQV SNNYSALQLH  180
LITLMQQQQQ QQQQQSSRAE ATHQHEILEA RSEDKKHEGG GGPVVPRQFM DLGPSATAET  240
DDQPSHSSSE ERTQSASPHP NNNKKDMVPL VGREESPESE GWVPNKVPKL NPSKTNVDQA  300
TEATMRKARV SVRARSEAPM ITDGCQWRKY GQKMAKGNPC PRAYYRCTMA VGCPVRKQVQ  360
RCAEDRTILI TTYEGTHNHP LPPAAMAMAS TTSAAASMLL SGSMSSADGL MNPNFLARAI  420
LPSSSSMATI SASAPFPTVT LDLTHTSPNP LQFQRPPTQF PVPFASVPTP PQPAAHVFGQ  480
ALYNQSKFSG LQLSQDIDAA QLGHQAPPPQ LHHQQPPPNH SSFADTLSAA TAAITADPNF  540
TAALAAAITS IMGGGQQPNS NNPTTTASTT TTTNTTTSNS NKIGSFPVN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-143	WRKY family protein