PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028066229.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB
Protein Properties Length: 315aa    MW: 35408.8 Da    PI: 8.7747
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028066229.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.13.1e-161459147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     rg W + Ed +l+++v+++G+ +W++Ia ++  gR++k+c++rw++ 
   XP_028066229.1 14 RGHWKPAEDSQLKQLVALYGPQNWNLIADKLE-GRSGKSCRLRWFNQ 59
                     899*****************************.***********996 PP
2Myb_DNA-binding54.42.9e-1766110147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      r ++++eE+e+l  a++ +G++ W+ Iar ++ gRt++ +k++w+ +
   XP_028066229.1  66 RRAFSEEEEERLMAAHRVYGNK-WAMIARLFP-GRTDNAVKNHWHVV 110
                      678*******************.*********.***********976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MEGGKQQSNK LCGRGHWKPA EDSQLKQLVA LYGPQNWNLI ADKLEGRSGK SCRLRWFNQL  60
DPRINRRAFS EEEEERLMAA HRVYGNKWAM IARLFPGRTD NAVKNHWHVV MARKYRQHSI  120
AYRRRKLSHS VVGSEPNTFS FYGGNFISSN HFPFDVPIGG FNVLHSMSNG TDEEAVLSSG  180
KDLLLDPCGQ TPFDFFTGLS SRYIPPFPTF YLKRVNDMNS CIGSPNKFWD PIVSRDDYDH  240
HPSQLLAMQY SSLSCNNQLS CLSDTTVSTS QVSVTKLSSS STSLLAADNT ANTARSHFEI  300
TISPPFIDFL GVGAT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26780.17e-78MYB family protein