PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028063940.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 230aa MW: 26479.1 Da PI: 4.462 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 57.7 | 2e-18 | 30 | 81 | 5 | 56 |
SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 5 ttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 f+++q++ Le++Fe+++++ +++ + A++lgL+ rqV +WFqN+Ra++k XP_028063940.1 30 NXFSDDQIRSLETMFESESKLEPRKKMQVARELGLQPRQVGIWFQNKRARWK 81 579************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 113.6 | 1.2e-36 | 30 | 119 | 4 | 93 |
HD-ZIP_I/II 4 rrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 +s++q+++LE++Fe+e+kLep++K+++areLglqprqv +WFqn+RAR+k+kqlE+dy++L++ y +l+++ e+L+ke+++L +l++ XP_028063940.1 30 NXFSDDQIRSLETMFESESKLEPRKKMQVARELGLQPRQVGIWFQNKRARWKSKQLERDYSVLRADYTTLVSQFEALKKEKQALVLQLQK 119 5699********************************************************************************999986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence |
MMMDGGEYSA DYLSRSNSVS KKKRNKNQNN XFSDDQIRSL ETMFESESKL EPRKKMQVAR 60 ELGLQPRQVG IWFQNKRARW KSKQLERDYS VLRADYTTLV SQFEALKKEK QALVLQLQKL 120 NDLMQKSRPE DNLGCRQGVP ENNSIGDRLD SGEDFKTEFA VKPSLSMEDD DNSNIEAKYF 180 GIDEEPELLN MAEVEPADSS LTSPENWGGF DSDGLLDQSG SSDQWWDFWS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G61890.1 | 5e-56 | HD-ZIP family protein |