PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028063461.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

WOX

Protein Properties

Length: 301aa MW: 33932.8 Da PI: 6.1034

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028063461.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	64.9	1.1e-20	95	155	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+t+ ql++Le+lF + n +ps+++++++++ l +++e++V+ WFqNrRa+ k+ XP_028063461.1 95 RQRWTPTPVQLQILERLFDQgNGTPSKQKIKDITSDLsqhgQISESNVYHWFQNRRARSKR 155 89***************99************************************97 PP
2	Wus_type_Homeobox	100.9	9.5e-33	95	157	3	65
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 r+RWtPtp Q++iLe+l+++G tP+k++i++it+ L+++G+i++ NV++WFQNr+aR+++kq XP_028063461.1 95 RQRWTPTPVQLQILERLFDQGNGTPSKQKIKDITSDLSQHGQISESNVYHWFQNRRARSKRKQ 157 79***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 301 aa Download sequence
MDWEKQQNQQ QRQDEVMNSS SNTTNNNNNG VFVKVMTDEQ LEILRKQIAA YAAICDQLVQ 60 MHKSLSSHSD LTGARLGNLY CDPLMTYVGH KISGRQRWTP TPVQLQILER LFDQGNGTPS 120 KQKIKDITSD LSQHGQISES NVYHWFQNRR ARSKRKQHVA APNNAESEVE TEVESPDGKK 180 TKSEDFESQH NPAPRAEDLC FQNPEISSGM RSLDSKSNKG EPMFPSNGSS KPERSLGQIS 240 FYDSMLSNPI TLVTLSASTT RISSCMMEKL IIFGIDHLIG KMEASGSYNP YLQEDDYDMT 300 S

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	149	157	RRARSKRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35550.1	7e-80	WOX family protein