PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028063287.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

TCP

Protein Properties

Length: 368aa MW: 39212.9 Da PI: 5.7375

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028063287.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	113.6	2.7e-35	95	184	1	93
TCP 1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.......eaesssssasnsssg 88 aa+++++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++t+ WLl+ a++ai+e+tgt++ +a ++ + +s XP_028063287.1 95 AAARRSSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETVRWLLEHAEQAIIEATGTGTVPAIAVsvggtlkIPTTS---------- 179 5899*************************************************************88888444222222111111.......... PP TCP 89 kaaks 93 + ak+ XP_028063287.1 180 STAKQ 184 11111 PP

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence
MSSFQEHEFE PDDDVGTSDL SSSEDNNNNN GFTNVSSMED QNPPPVLKEE PIDSEPESPD 60 QKPININNPE SQTPIGMVPL MQMQLPIQVA SPVAAAARRS STKDRHTKVE GRGRRIRIPA 120 TCAARIFQLT RELGHKSDGE TVRWLLEHAE QAIIEATGTG TVPAIAVSVG GTLKIPTTSS 180 TAKQEEIEGR KRRRRASNSE FYDVAGTNDG VSQTAGLAPV VPAAVAPPQG LVPVWAVSNA 240 GMMIPSNAFW MIPPPPHTAA RPVAGLNQPQ LWAISPSVTP VFDVSARPIS SFVSAPQPVG 300 GGVEIRAPSP AVSGATFGTK KSSMAPASVS SGSNNKAQML RDFSLEIYDK KELQFMGRSG 360 NQQTQSTS

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence

MSSFQEHEFE PDDDVGTSDL SSSEDNNNNN GFTNVSSMED QNPPPVLKEE PIDSEPESPD  60
QKPININNPE SQTPIGMVPL MQMQLPIQVA SPVAAAARRS STKDRHTKVE GRGRRIRIPA  120
TCAARIFQLT RELGHKSDGE TVRWLLEHAE QAIIEATGTG TVPAIAVSVG GTLKIPTTSS  180
TAKQEEIEGR KRRRRASNSE FYDVAGTNDG VSQTAGLAPV VPAAVAPPQG LVPVWAVSNA  240
GMMIPSNAFW MIPPPPHTAA RPVAGLNQPQ LWAISPSVTP VFDVSARPIS SFVSAPQPVG  300
GGVEIRAPSP AVSGATFGTK KSSMAPASVS SGSNNKAQML RDFSLEIYDK KELQFMGRSG  360
NQQTQSTS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	190	194	RKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G51910.2	1e-55	TCP family protein