PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028061184.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

WOX

Protein Properties

Length: 361aa MW: 40838.4 Da PI: 6.9449

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028061184.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	69.3	4.7e-22	83	142	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eql++Leel+++ +r+psa+++++++++l +++ ++V++WFqN++a+e++ XP_028061184.1 83 SRWNPTPEQLQTLEELYRRgTRTPSADQIQHITAQLrrygKIEGKNVFYWFQNHKARERQ 142 7***************99************************************97 PP
2	Wus_type_Homeobox	116	1.8e-37	82	144	3	65
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++RW+PtpeQ++ Leely++G+rtP++++iq+ita+L++yGkie+kNVfyWFQN+kaRerqk+ XP_028061184.1 82 SSRWNPTPEQLQTLEELYRRGTRTPSADQIQHITAQLRRYGKIEGKNVFYWFQNHKARERQKR 144 79***********************************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MWMMGYSDGG ELNFSDSFNG RRLRPLIPRP ASSISSTTTS TTTNPPCLSR LHGSDLLAFN 60 HHLSTMTDQN KRDFNPHQVV VSSRWNPTPE QLQTLEELYR RGTRTPSADQ IQHITAQLRR 120 YGKIEGKNVF YWFQNHKARE RQKRRRQLES VSSDDLCLDV ENIERKESGA NRTGYEVEQT 180 KSWALPTNCS TLSEKTVSTT QRAAPKAAAA VPECGAEDGW VQFDEEEGEL QQRNLVERNA 240 TWQMMHLSCS PPPTHLINPS TTTTSIVTTT TTTNTIPNSE TITMDPNLIK TSREDLNIFV 300 APYRDQTGRR ASQTLQLFPL RSSRDGDENT DNEAKMSAAA AAAMNPNFTP YQYFEFLPLK 360 N

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MWMMGYSDGG ELNFSDSFNG RRLRPLIPRP ASSISSTTTS TTTNPPCLSR LHGSDLLAFN  60
HHLSTMTDQN KRDFNPHQVV VSSRWNPTPE QLQTLEELYR RGTRTPSADQ IQHITAQLRR  120
YGKIEGKNVF YWFQNHKARE RQKRRRQLES VSSDDLCLDV ENIERKESGA NRTGYEVEQT  180
KSWALPTNCS TLSEKTVSTT QRAAPKAAAA VPECGAEDGW VQFDEEEGEL QQRNLVERNA  240
TWQMMHLSCS PPPTHLINPS TTTTSIVTTT TTTNTIPNSE TITMDPNLIK TSREDLNIFV  300
APYRDQTGRR ASQTLQLFPL RSSRDGDENT DNEAKMSAAA AAAMNPNFTP YQYFEFLPLK  360
N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18010.1	7e-56	WOX family protein