PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028059869.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family WOX
Protein Properties Length: 320aa    MW: 37298 Da    PI: 8.3297
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028059869.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox63.62.9e-2067125356
                     --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHH CS
        Homeobox   3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakek 56 
                     +R+++t+eqle+Leel+++  r+psa+++ +++++l    +++ ++V++WFqN++a+++
  XP_028059869.1  67 SRWNPTPEQLEALEELYRRgIRTPSADQIHHITAQLrqygKIEGKNVFYWFQNHKARDR 125
                     7*****************99*************************************98 PP
2Wus_type_Homeobox1116.5e-3666127364
  Wus_type_Homeobox   3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 
                        ++RW+PtpeQ++ Leely++G+rtP++++i++ita+L++yGkie+kNVfyWFQN+kaR+r +
     XP_028059869.1  66 SSRWNPTPEQLEALEELYRRGIRTPSADQIHHITAQLRQYGKIEGKNVFYWFQNHKARDRYH 127
                        79*********************************************************965 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MWMIGYNKNK NNRELISIPE PVSFNGGNHR PLIPWPCPCP VNVGEEVEQS KREWKWLNRQ  60
EVSVVSSRWN PTPEQLEALE ELYRRGIRTP SADQIHHITA QLRQYGKIEG KNVFYWFQNH  120
KARDRYHKRR RQVESASHQE YCDIEATEKE ESEASRRTGF EQIKNWAFPI NCSTFAEGGQ  180
AKTAVEECIT DHRWVQLYEG GKLSHQRRNL CRSRIDLCQC GSKMMQPSSC SPLPTHLINN  240
TNTNTSITMD PAKLKKSTHH NHQDLKMFIA PATPRDDQTL QLFPRRSNIT EKDETAEISL  300
AAMNPDFTPY QFFEFLPLKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18010.11e-43WOX family protein