PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028059868.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

WOX

Protein Properties

Length: 321aa MW: 37413.2 Da PI: 8.7798

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028059868.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	63.6	2.9e-20	61	119	3	56
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakek 56 +R+++t+eqle+Leel+++ r+psa+++ +++++l +++ ++V++WFqN++a+++ XP_028059868.1 61 SRWNPTPEQLEALEELYRRgIRTPSADQIHHITAQLrqygKIEGKNVFYWFQNHKARDR 119 7***************99***********************************98 PP
2	Wus_type_Homeobox	111	6.6e-36	60	121	3	64
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 ++RW+PtpeQ++ Leely++G+rtP++++i++ita+L++yGkie+kNVfyWFQN+kaR+r + XP_028059868.1 60 SSRWNPTPEQLEALEELYRRGIRTPSADQIHHITAQLRQYGKIEGKNVFYWFQNHKARDRYH 121 79*********************************************************965 PP

Sequence ? help Back to Top
Protein Sequence Length: 321 aa Download sequence
MWMIGYNKNK NNRELISIPE PVSFNGGNHR PLIPWPCPCP VEQSKREWKW LNRQEVSVVS 60 SRWNPTPEQL EALEELYRRG IRTPSADQIH HITAQLRQYG KIEGKNVFYW FQNHKARDRY 120 HKRRRQVESA SHQEYCDIEA TEKEESEASR RTGFEQIKNW AFPINCSTFA EKNASTIQGG 180 QAKTAVEECI TDHRWVQLYE GGKLSHQRRN LCRSRIDLCQ CGSKMMQPSS CSPLPTHLIN 240 NTNTNTSITM DPAKLKKSTH HNHQDLKMFI APATPRDDQT LQLFPRRSNI TEKDETAEIS 300 LAAMNPDFTP YQFFEFLPLK N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18010.1	1e-43	WOX family protein